Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29108 | 87547;87548;87549 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
N2AB | 27467 | 82624;82625;82626 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
N2A | 26540 | 79843;79844;79845 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
N2B | 20043 | 60352;60353;60354 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
Novex-1 | 20168 | 60727;60728;60729 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
Novex-2 | 20235 | 60928;60929;60930 | chr2:178558032;178558031;178558030 | chr2:179422759;179422758;179422757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1393606181 | -0.339 | 0.014 | N | 0.201 | 0.055 | 0.314716216878 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/I | rs1393606181 | -0.339 | 0.014 | N | 0.201 | 0.055 | 0.314716216878 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1568 | likely_benign | 0.1451 | benign | -0.842 | Destabilizing | 0.822 | D | 0.437 | neutral | N | 0.490516701 | None | None | I |
V/C | 0.5963 | likely_pathogenic | 0.5625 | ambiguous | -0.691 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | I |
V/D | 0.3313 | likely_benign | 0.2995 | benign | -0.428 | Destabilizing | 0.99 | D | 0.815 | deleterious | N | 0.484764165 | None | None | I |
V/E | 0.2866 | likely_benign | 0.2716 | benign | -0.53 | Destabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | I |
V/F | 0.1631 | likely_benign | 0.1512 | benign | -1.007 | Destabilizing | 0.942 | D | 0.758 | deleterious | N | 0.510142612 | None | None | I |
V/G | 0.184 | likely_benign | 0.1824 | benign | -1.016 | Destabilizing | 0.971 | D | 0.785 | deleterious | N | 0.48033978 | None | None | I |
V/H | 0.4741 | ambiguous | 0.4318 | ambiguous | -0.549 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | I |
V/I | 0.073 | likely_benign | 0.07 | benign | -0.522 | Destabilizing | 0.014 | N | 0.201 | neutral | N | 0.499714975 | None | None | I |
V/K | 0.3115 | likely_benign | 0.289 | benign | -0.57 | Destabilizing | 0.978 | D | 0.781 | deleterious | None | None | None | None | I |
V/L | 0.1365 | likely_benign | 0.121 | benign | -0.522 | Destabilizing | 0.247 | N | 0.431 | neutral | N | 0.476646114 | None | None | I |
V/M | 0.095 | likely_benign | 0.0899 | benign | -0.328 | Destabilizing | 0.956 | D | 0.777 | deleterious | None | None | None | None | I |
V/N | 0.1827 | likely_benign | 0.1573 | benign | -0.294 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | I |
V/P | 0.8213 | likely_pathogenic | 0.7708 | pathogenic | -0.593 | Destabilizing | 0.993 | D | 0.805 | deleterious | None | None | None | None | I |
V/Q | 0.255 | likely_benign | 0.2421 | benign | -0.575 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | I |
V/R | 0.297 | likely_benign | 0.2734 | benign | -0.02 | Destabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | I |
V/S | 0.1589 | likely_benign | 0.1449 | benign | -0.746 | Destabilizing | 0.978 | D | 0.765 | deleterious | None | None | None | None | I |
V/T | 0.1331 | likely_benign | 0.1202 | benign | -0.746 | Destabilizing | 0.86 | D | 0.642 | neutral | None | None | None | None | I |
V/W | 0.7887 | likely_pathogenic | 0.7776 | pathogenic | -1.061 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | I |
V/Y | 0.5062 | ambiguous | 0.4699 | ambiguous | -0.758 | Destabilizing | 0.978 | D | 0.784 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.