Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29109 | 87550;87551;87552 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
N2AB | 27468 | 82627;82628;82629 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
N2A | 26541 | 79846;79847;79848 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
N2B | 20044 | 60355;60356;60357 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
Novex-1 | 20169 | 60730;60731;60732 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
Novex-2 | 20236 | 60931;60932;60933 | chr2:178558029;178558028;178558027 | chr2:179422756;179422755;179422754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs753496654 | 0.008 | None | N | 0.197 | 0.165 | 0.159798565429 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs753496654 | 0.008 | None | N | 0.197 | 0.165 | 0.159798565429 | gnomAD-4.0.0 | 3.18221E-06 | None | None | None | None | N | None | 0 | 4.57247E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0476 | likely_benign | 0.0467 | benign | -0.278 | Destabilizing | None | N | 0.091 | neutral | N | 0.338727942 | None | None | N |
T/C | 0.3171 | likely_benign | 0.278 | benign | -0.31 | Destabilizing | 0.356 | N | 0.295 | neutral | None | None | None | None | N |
T/D | 0.3657 | ambiguous | 0.3458 | ambiguous | 0.061 | Stabilizing | 0.072 | N | 0.326 | neutral | None | None | None | None | N |
T/E | 0.2738 | likely_benign | 0.2625 | benign | -0.028 | Destabilizing | 0.072 | N | 0.275 | neutral | None | None | None | None | N |
T/F | 0.2129 | likely_benign | 0.1939 | benign | -0.838 | Destabilizing | 0.214 | N | 0.378 | neutral | None | None | None | None | N |
T/G | 0.1519 | likely_benign | 0.1415 | benign | -0.374 | Destabilizing | 0.016 | N | 0.302 | neutral | None | None | None | None | N |
T/H | 0.2689 | likely_benign | 0.2359 | benign | -0.592 | Destabilizing | 0.628 | D | 0.337 | neutral | None | None | None | None | N |
T/I | 0.1092 | likely_benign | 0.106 | benign | -0.147 | Destabilizing | None | N | 0.197 | neutral | N | 0.4086466 | None | None | N |
T/K | 0.2149 | likely_benign | 0.1888 | benign | -0.362 | Destabilizing | 0.055 | N | 0.269 | neutral | N | 0.362970239 | None | None | N |
T/L | 0.0861 | likely_benign | 0.0798 | benign | -0.147 | Destabilizing | 0.002 | N | 0.255 | neutral | None | None | None | None | N |
T/M | 0.0797 | likely_benign | 0.0759 | benign | -0.051 | Destabilizing | 0.214 | N | 0.288 | neutral | None | None | None | None | N |
T/N | 0.1192 | likely_benign | 0.1179 | benign | -0.139 | Destabilizing | 0.136 | N | 0.223 | neutral | None | None | None | None | N |
T/P | 0.0795 | likely_benign | 0.0726 | benign | -0.164 | Destabilizing | 0.055 | N | 0.309 | neutral | N | 0.377976977 | None | None | N |
T/Q | 0.2223 | likely_benign | 0.1987 | benign | -0.379 | Destabilizing | 0.356 | N | 0.321 | neutral | None | None | None | None | N |
T/R | 0.198 | likely_benign | 0.171 | benign | -0.051 | Destabilizing | 0.055 | N | 0.327 | neutral | N | 0.311194624 | None | None | N |
T/S | 0.0918 | likely_benign | 0.089 | benign | -0.327 | Destabilizing | 0.012 | N | 0.231 | neutral | N | 0.39006084 | None | None | N |
T/V | 0.0863 | likely_benign | 0.0828 | benign | -0.164 | Destabilizing | 0.002 | N | 0.178 | neutral | None | None | None | None | N |
T/W | 0.5861 | likely_pathogenic | 0.5303 | ambiguous | -0.872 | Destabilizing | 0.864 | D | 0.363 | neutral | None | None | None | None | N |
T/Y | 0.264 | likely_benign | 0.2274 | benign | -0.577 | Destabilizing | 0.356 | N | 0.356 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.