Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29115 | 87568;87569;87570 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
N2AB | 27474 | 82645;82646;82647 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
N2A | 26547 | 79864;79865;79866 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
N2B | 20050 | 60373;60374;60375 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
Novex-1 | 20175 | 60748;60749;60750 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
Novex-2 | 20242 | 60949;60950;60951 | chr2:178558011;178558010;178558009 | chr2:179422738;179422737;179422736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | None | None | 1.0 | D | 0.867 | 0.815 | 0.904560257206 | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99433E-07 | 0 | 0 |
Y/H | rs1181280302 | -2.249 | 1.0 | D | 0.797 | 0.839 | 0.734356017273 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/H | rs1181280302 | -2.249 | 1.0 | D | 0.797 | 0.839 | 0.734356017273 | gnomAD-4.0.0 | 5.47369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19546E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9933 | likely_pathogenic | 0.9932 | pathogenic | -2.645 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/C | 0.8584 | likely_pathogenic | 0.8497 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.570540615 | None | None | N |
Y/D | 0.9959 | likely_pathogenic | 0.9962 | pathogenic | -2.738 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.596078727 | None | None | N |
Y/E | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -2.497 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/F | 0.2184 | likely_benign | 0.1968 | benign | -0.878 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | D | 0.556480371 | None | None | N |
Y/G | 0.9856 | likely_pathogenic | 0.9874 | pathogenic | -3.109 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/H | 0.952 | likely_pathogenic | 0.9406 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.595876922 | None | None | N |
Y/I | 0.9081 | likely_pathogenic | 0.886 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Y/K | 0.9972 | likely_pathogenic | 0.9969 | pathogenic | -2.12 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/L | 0.8259 | likely_pathogenic | 0.8173 | pathogenic | -1.123 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
Y/M | 0.944 | likely_pathogenic | 0.9387 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Y/N | 0.9771 | likely_pathogenic | 0.9774 | pathogenic | -2.976 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.596078727 | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/Q | 0.9963 | likely_pathogenic | 0.9956 | pathogenic | -2.576 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Y/R | 0.9913 | likely_pathogenic | 0.9903 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/S | 0.9863 | likely_pathogenic | 0.9866 | pathogenic | -3.429 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.596078727 | None | None | N |
Y/T | 0.9914 | likely_pathogenic | 0.9906 | pathogenic | -3.046 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/V | 0.8924 | likely_pathogenic | 0.8758 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Y/W | 0.6763 | likely_pathogenic | 0.6321 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.