Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29119 | 87580;87581;87582 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
N2AB | 27478 | 82657;82658;82659 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
N2A | 26551 | 79876;79877;79878 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
N2B | 20054 | 60385;60386;60387 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
Novex-1 | 20179 | 60760;60761;60762 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
Novex-2 | 20246 | 60961;60962;60963 | chr2:178557999;178557998;178557997 | chr2:179422726;179422725;179422724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | D | 0.887 | 0.734 | 0.682284130214 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8578E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6459 | likely_pathogenic | 0.5961 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/D | 0.9967 | likely_pathogenic | 0.9966 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.578869977 | None | None | N |
A/E | 0.9901 | likely_pathogenic | 0.9895 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
A/F | 0.898 | likely_pathogenic | 0.8694 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
A/G | 0.3528 | ambiguous | 0.3779 | ambiguous | -1.107 | Destabilizing | 1.0 | D | 0.583 | neutral | D | 0.562214843 | None | None | N |
A/H | 0.9941 | likely_pathogenic | 0.9934 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
A/I | 0.4859 | ambiguous | 0.4106 | ambiguous | -0.594 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
A/K | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
A/L | 0.3825 | ambiguous | 0.3324 | benign | -0.594 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
A/M | 0.5549 | ambiguous | 0.4997 | ambiguous | -0.445 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/N | 0.988 | likely_pathogenic | 0.9875 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
A/P | 0.9893 | likely_pathogenic | 0.9888 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.578668173 | None | None | N |
A/Q | 0.983 | likely_pathogenic | 0.9809 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
A/R | 0.9914 | likely_pathogenic | 0.9912 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
A/S | 0.4244 | ambiguous | 0.4201 | ambiguous | -1.198 | Destabilizing | 1.0 | D | 0.579 | neutral | D | 0.578264564 | None | None | N |
A/T | 0.3249 | likely_benign | 0.2836 | benign | -1.204 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.57806276 | None | None | N |
A/V | 0.2037 | likely_benign | 0.1586 | benign | -0.668 | Destabilizing | 1.0 | D | 0.655 | neutral | D | 0.524947067 | None | None | N |
A/W | 0.9952 | likely_pathogenic | 0.9943 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/Y | 0.9778 | likely_pathogenic | 0.974 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.