Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29120 | 87583;87584;87585 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
N2AB | 27479 | 82660;82661;82662 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
N2A | 26552 | 79879;79880;79881 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
N2B | 20055 | 60388;60389;60390 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
Novex-1 | 20180 | 60763;60764;60765 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
Novex-2 | 20247 | 60964;60965;60966 | chr2:178557996;178557995;178557994 | chr2:179422723;179422722;179422721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.505 | N | 0.472 | 0.24 | 0.487772906946 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3188 | likely_benign | 0.3081 | benign | -0.859 | Destabilizing | 0.973 | D | 0.539 | neutral | None | None | None | None | N |
A/D | 0.3123 | likely_benign | 0.3102 | benign | -1.164 | Destabilizing | 0.338 | N | 0.655 | neutral | N | 0.485324312 | None | None | N |
A/E | 0.231 | likely_benign | 0.2254 | benign | -1.304 | Destabilizing | 0.404 | N | 0.495 | neutral | None | None | None | None | N |
A/F | 0.2784 | likely_benign | 0.2561 | benign | -1.338 | Destabilizing | 0.906 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/G | 0.1448 | likely_benign | 0.1483 | benign | -0.785 | Destabilizing | 0.174 | N | 0.429 | neutral | N | 0.485671029 | None | None | N |
A/H | 0.4014 | ambiguous | 0.374 | ambiguous | -0.872 | Destabilizing | 0.973 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/I | 0.1896 | likely_benign | 0.1698 | benign | -0.629 | Destabilizing | 0.826 | D | 0.577 | neutral | None | None | None | None | N |
A/K | 0.4276 | ambiguous | 0.4139 | ambiguous | -0.886 | Destabilizing | 0.404 | N | 0.527 | neutral | None | None | None | None | N |
A/L | 0.1603 | likely_benign | 0.1499 | benign | -0.629 | Destabilizing | 0.575 | D | 0.495 | neutral | None | None | None | None | N |
A/M | 0.1745 | likely_benign | 0.1591 | benign | -0.375 | Destabilizing | 0.991 | D | 0.588 | neutral | None | None | None | None | N |
A/N | 0.2183 | likely_benign | 0.2016 | benign | -0.585 | Destabilizing | 0.018 | N | 0.46 | neutral | None | None | None | None | N |
A/P | 0.9009 | likely_pathogenic | 0.9039 | pathogenic | -0.616 | Destabilizing | 0.879 | D | 0.565 | neutral | N | 0.504699507 | None | None | N |
A/Q | 0.2717 | likely_benign | 0.2648 | benign | -0.941 | Destabilizing | 0.826 | D | 0.58 | neutral | None | None | None | None | N |
A/R | 0.3978 | ambiguous | 0.3981 | ambiguous | -0.379 | Destabilizing | 0.826 | D | 0.537 | neutral | None | None | None | None | N |
A/S | 0.0775 | likely_benign | 0.0769 | benign | -0.774 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.388584412 | None | None | N |
A/T | 0.0702 | likely_benign | 0.0661 | benign | -0.848 | Destabilizing | 0.338 | N | 0.416 | neutral | N | 0.410285049 | None | None | N |
A/V | 0.1091 | likely_benign | 0.1019 | benign | -0.616 | Destabilizing | 0.505 | D | 0.472 | neutral | N | 0.466565193 | None | None | N |
A/W | 0.6813 | likely_pathogenic | 0.6664 | pathogenic | -1.475 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | N |
A/Y | 0.3856 | ambiguous | 0.3612 | ambiguous | -1.122 | Destabilizing | 0.906 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.