Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29124 | 87595;87596;87597 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
N2AB | 27483 | 82672;82673;82674 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
N2A | 26556 | 79891;79892;79893 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
N2B | 20059 | 60400;60401;60402 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
Novex-1 | 20184 | 60775;60776;60777 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
Novex-2 | 20251 | 60976;60977;60978 | chr2:178557984;178557983;178557982 | chr2:179422711;179422710;179422709 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | D | 0.853 | 0.768 | 0.53586618445 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4581 | ambiguous | 0.516 | ambiguous | -0.096 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.571351422 | None | None | N |
G/C | 0.6324 | likely_pathogenic | 0.6956 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.572562247 | None | None | N |
G/D | 0.833 | likely_pathogenic | 0.8903 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.586967174 | None | None | N |
G/E | 0.8633 | likely_pathogenic | 0.9153 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/F | 0.9465 | likely_pathogenic | 0.9602 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/H | 0.9004 | likely_pathogenic | 0.9289 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
G/I | 0.9093 | likely_pathogenic | 0.9376 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/K | 0.8937 | likely_pathogenic | 0.9308 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
G/L | 0.9115 | likely_pathogenic | 0.9394 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/M | 0.9192 | likely_pathogenic | 0.9428 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/N | 0.7988 | likely_pathogenic | 0.8573 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
G/P | 0.9972 | likely_pathogenic | 0.9972 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/Q | 0.8186 | likely_pathogenic | 0.8708 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
G/R | 0.7867 | likely_pathogenic | 0.8405 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.587572587 | None | None | N |
G/S | 0.3372 | likely_benign | 0.3754 | ambiguous | -0.24 | Destabilizing | 1.0 | D | 0.792 | deleterious | D | 0.58676537 | None | None | N |
G/T | 0.7283 | likely_pathogenic | 0.783 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
G/V | 0.8329 | likely_pathogenic | 0.8798 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.588178 | None | None | N |
G/W | 0.9368 | likely_pathogenic | 0.9515 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
G/Y | 0.9201 | likely_pathogenic | 0.9414 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.