Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29127 | 87604;87605;87606 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
N2AB | 27486 | 82681;82682;82683 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
N2A | 26559 | 79900;79901;79902 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
N2B | 20062 | 60409;60410;60411 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
Novex-1 | 20187 | 60784;60785;60786 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
Novex-2 | 20254 | 60985;60986;60987 | chr2:178557975;178557974;178557973 | chr2:179422702;179422701;179422700 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1351987923 | None | 0.01 | N | 0.289 | 0.11 | 0.318252033908 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1351987923 | None | 0.01 | N | 0.289 | 0.11 | 0.318252033908 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3255 | likely_benign | 0.2908 | benign | -0.104 | Destabilizing | 0.648 | D | 0.591 | neutral | None | None | None | None | N |
K/C | 0.6941 | likely_pathogenic | 0.656 | pathogenic | -0.142 | Destabilizing | 0.993 | D | 0.78 | deleterious | None | None | None | None | N |
K/D | 0.6166 | likely_pathogenic | 0.5509 | ambiguous | -0.055 | Destabilizing | 0.866 | D | 0.781 | deleterious | None | None | None | None | N |
K/E | 0.1756 | likely_benign | 0.1543 | benign | -0.04 | Destabilizing | 0.41 | N | 0.503 | neutral | N | 0.437220934 | None | None | N |
K/F | 0.8644 | likely_pathogenic | 0.8471 | pathogenic | -0.208 | Destabilizing | 0.98 | D | 0.765 | deleterious | None | None | None | None | N |
K/G | 0.5041 | ambiguous | 0.4647 | ambiguous | -0.348 | Destabilizing | 0.866 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/H | 0.3189 | likely_benign | 0.2905 | benign | -0.719 | Destabilizing | 0.98 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/I | 0.4593 | ambiguous | 0.4436 | ambiguous | 0.469 | Stabilizing | 0.908 | D | 0.787 | deleterious | N | 0.5147245 | None | None | N |
K/L | 0.4614 | ambiguous | 0.4447 | ambiguous | 0.469 | Stabilizing | 0.866 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/M | 0.2831 | likely_benign | 0.2645 | benign | 0.389 | Stabilizing | 0.993 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/N | 0.4499 | ambiguous | 0.4106 | ambiguous | 0.143 | Stabilizing | 0.83 | D | 0.679 | prob.neutral | N | 0.484401593 | None | None | N |
K/P | 0.8879 | likely_pathogenic | 0.8624 | pathogenic | 0.307 | Stabilizing | 0.929 | D | 0.783 | deleterious | None | None | None | None | N |
K/Q | 0.1423 | likely_benign | 0.1286 | benign | -0.072 | Destabilizing | 0.83 | D | 0.671 | neutral | N | 0.483708159 | None | None | N |
K/R | 0.0844 | likely_benign | 0.0837 | benign | -0.172 | Destabilizing | 0.01 | N | 0.289 | neutral | N | 0.476590186 | None | None | N |
K/S | 0.3651 | ambiguous | 0.3138 | benign | -0.371 | Destabilizing | 0.648 | D | 0.578 | neutral | None | None | None | None | N |
K/T | 0.135 | likely_benign | 0.1162 | benign | -0.199 | Destabilizing | 0.83 | D | 0.731 | prob.delet. | N | 0.438375727 | None | None | N |
K/V | 0.3314 | likely_benign | 0.3101 | benign | 0.307 | Stabilizing | 0.866 | D | 0.777 | deleterious | None | None | None | None | N |
K/W | 0.8548 | likely_pathogenic | 0.835 | pathogenic | -0.166 | Destabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | N |
K/Y | 0.7424 | likely_pathogenic | 0.7175 | pathogenic | 0.165 | Stabilizing | 0.929 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.