Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29137 | 87634;87635;87636 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
N2AB | 27496 | 82711;82712;82713 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
N2A | 26569 | 79930;79931;79932 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
N2B | 20072 | 60439;60440;60441 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
Novex-1 | 20197 | 60814;60815;60816 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
Novex-2 | 20264 | 61015;61016;61017 | chr2:178557945;178557944;178557943 | chr2:179422672;179422671;179422670 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.988 | N | 0.535 | 0.291 | 0.364730456448 | gnomAD-4.0.0 | 1.59303E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
R/K | rs1210340832 | None | 0.355 | N | 0.263 | 0.14 | 0.163833314356 | gnomAD-4.0.0 | 1.36909E-06 | None | None | None | None | I | None | 2.98686E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
R/M | None | None | 1.0 | N | 0.57 | 0.262 | 0.253726318573 | gnomAD-4.0.0 | 6.84543E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99423E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6865 | likely_pathogenic | 0.6675 | pathogenic | -0.319 | Destabilizing | 0.982 | D | 0.567 | neutral | None | None | None | None | I |
R/C | 0.215 | likely_benign | 0.2108 | benign | -0.34 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
R/D | 0.9578 | likely_pathogenic | 0.9629 | pathogenic | -0.053 | Destabilizing | 0.997 | D | 0.741 | deleterious | None | None | None | None | I |
R/E | 0.7122 | likely_pathogenic | 0.7252 | pathogenic | 0.009 | Stabilizing | 0.982 | D | 0.467 | neutral | None | None | None | None | I |
R/F | 0.8341 | likely_pathogenic | 0.8439 | pathogenic | -0.519 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
R/G | 0.6793 | likely_pathogenic | 0.6792 | pathogenic | -0.527 | Destabilizing | 0.988 | D | 0.535 | neutral | N | 0.482038803 | None | None | I |
R/H | 0.2004 | likely_benign | 0.208 | benign | -0.894 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
R/I | 0.4236 | ambiguous | 0.4136 | ambiguous | 0.2 | Stabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
R/K | 0.1204 | likely_benign | 0.1128 | benign | -0.319 | Destabilizing | 0.355 | N | 0.263 | neutral | N | 0.412532268 | None | None | I |
R/L | 0.5079 | ambiguous | 0.5189 | ambiguous | 0.2 | Stabilizing | 0.991 | D | 0.535 | neutral | None | None | None | None | I |
R/M | 0.5357 | ambiguous | 0.5401 | ambiguous | -0.056 | Destabilizing | 1.0 | D | 0.57 | neutral | N | 0.470935987 | None | None | I |
R/N | 0.8759 | likely_pathogenic | 0.8848 | pathogenic | 0.099 | Stabilizing | 0.997 | D | 0.573 | neutral | None | None | None | None | I |
R/P | 0.7487 | likely_pathogenic | 0.7701 | pathogenic | 0.047 | Stabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | I |
R/Q | 0.1663 | likely_benign | 0.1664 | benign | -0.118 | Destabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | I |
R/S | 0.8019 | likely_pathogenic | 0.7964 | pathogenic | -0.447 | Destabilizing | 0.976 | D | 0.706 | prob.delet. | N | 0.458819213 | None | None | I |
R/T | 0.5655 | likely_pathogenic | 0.5432 | ambiguous | -0.247 | Destabilizing | 0.997 | D | 0.557 | neutral | N | 0.489243612 | None | None | I |
R/V | 0.5381 | ambiguous | 0.5236 | ambiguous | 0.047 | Stabilizing | 0.997 | D | 0.808 | deleterious | None | None | None | None | I |
R/W | 0.493 | ambiguous | 0.5129 | ambiguous | -0.427 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.482545782 | None | None | I |
R/Y | 0.6896 | likely_pathogenic | 0.7062 | pathogenic | -0.05 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.