Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2913787634;87635;87636 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
N2AB2749682711;82712;82713 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
N2A2656979930;79931;79932 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
N2B2007260439;60440;60441 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
Novex-12019760814;60815;60816 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
Novex-22026461015;61016;61017 chr2:178557945;178557944;178557943chr2:179422672;179422671;179422670
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: AGG
  • RefSeq wild type template codon: TCC
  • Domain: Fn3-100
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.39
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/G None None 0.988 N 0.535 0.291 0.364730456448 gnomAD-4.0.0 1.59303E-06 None None None None I None 0 0 None 0 0 None 0 0 2.85776E-06 0 0
R/K rs1210340832 None 0.355 N 0.263 0.14 0.163833314356 gnomAD-4.0.0 1.36909E-06 None None None None I None 2.98686E-05 0 None 0 0 None 0 0 0 1.15931E-05 0
R/M None None 1.0 N 0.57 0.262 0.253726318573 gnomAD-4.0.0 6.84543E-06 None None None None I None 0 0 None 0 0 None 0 0 8.99423E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.6865 likely_pathogenic 0.6675 pathogenic -0.319 Destabilizing 0.982 D 0.567 neutral None None None None I
R/C 0.215 likely_benign 0.2108 benign -0.34 Destabilizing 1.0 D 0.846 deleterious None None None None I
R/D 0.9578 likely_pathogenic 0.9629 pathogenic -0.053 Destabilizing 0.997 D 0.741 deleterious None None None None I
R/E 0.7122 likely_pathogenic 0.7252 pathogenic 0.009 Stabilizing 0.982 D 0.467 neutral None None None None I
R/F 0.8341 likely_pathogenic 0.8439 pathogenic -0.519 Destabilizing 0.999 D 0.811 deleterious None None None None I
R/G 0.6793 likely_pathogenic 0.6792 pathogenic -0.527 Destabilizing 0.988 D 0.535 neutral N 0.482038803 None None I
R/H 0.2004 likely_benign 0.208 benign -0.894 Destabilizing 0.999 D 0.571 neutral None None None None I
R/I 0.4236 ambiguous 0.4136 ambiguous 0.2 Stabilizing 0.999 D 0.845 deleterious None None None None I
R/K 0.1204 likely_benign 0.1128 benign -0.319 Destabilizing 0.355 N 0.263 neutral N 0.412532268 None None I
R/L 0.5079 ambiguous 0.5189 ambiguous 0.2 Stabilizing 0.991 D 0.535 neutral None None None None I
R/M 0.5357 ambiguous 0.5401 ambiguous -0.056 Destabilizing 1.0 D 0.57 neutral N 0.470935987 None None I
R/N 0.8759 likely_pathogenic 0.8848 pathogenic 0.099 Stabilizing 0.997 D 0.573 neutral None None None None I
R/P 0.7487 likely_pathogenic 0.7701 pathogenic 0.047 Stabilizing 0.999 D 0.842 deleterious None None None None I
R/Q 0.1663 likely_benign 0.1664 benign -0.118 Destabilizing 0.995 D 0.609 neutral None None None None I
R/S 0.8019 likely_pathogenic 0.7964 pathogenic -0.447 Destabilizing 0.976 D 0.706 prob.delet. N 0.458819213 None None I
R/T 0.5655 likely_pathogenic 0.5432 ambiguous -0.247 Destabilizing 0.997 D 0.557 neutral N 0.489243612 None None I
R/V 0.5381 ambiguous 0.5236 ambiguous 0.047 Stabilizing 0.997 D 0.808 deleterious None None None None I
R/W 0.493 ambiguous 0.5129 ambiguous -0.427 Destabilizing 1.0 D 0.851 deleterious N 0.482545782 None None I
R/Y 0.6896 likely_pathogenic 0.7062 pathogenic -0.05 Destabilizing 0.999 D 0.833 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.