Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29141 | 87646;87647;87648 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
N2AB | 27500 | 82723;82724;82725 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
N2A | 26573 | 79942;79943;79944 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
N2B | 20076 | 60451;60452;60453 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
Novex-1 | 20201 | 60826;60827;60828 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
Novex-2 | 20268 | 61027;61028;61029 | chr2:178557933;178557932;178557931 | chr2:179422660;179422659;179422658 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.039 | D | 0.613 | 0.654 | 0.449088463789 | gnomAD-4.0.0 | 1.59295E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
P/S | None | None | 0.865 | D | 0.796 | 0.739 | 0.603797353847 | gnomAD-4.0.0 | 3.18589E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71562E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4922 | ambiguous | 0.651 | pathogenic | -2.251 | Highly Destabilizing | 0.039 | N | 0.613 | neutral | D | 0.59674486 | None | None | N |
P/C | 0.8792 | likely_pathogenic | 0.8925 | pathogenic | -2.009 | Highly Destabilizing | 0.998 | D | 0.918 | deleterious | None | None | None | None | N |
P/D | 0.999 | likely_pathogenic | 0.9995 | pathogenic | -3.407 | Highly Destabilizing | 0.992 | D | 0.827 | deleterious | None | None | None | None | N |
P/E | 0.9959 | likely_pathogenic | 0.9975 | pathogenic | -3.155 | Highly Destabilizing | 0.983 | D | 0.811 | deleterious | None | None | None | None | N |
P/F | 0.9975 | likely_pathogenic | 0.9987 | pathogenic | -1.184 | Destabilizing | 0.998 | D | 0.923 | deleterious | None | None | None | None | N |
P/G | 0.9798 | likely_pathogenic | 0.9901 | pathogenic | -2.793 | Highly Destabilizing | 0.895 | D | 0.845 | deleterious | None | None | None | None | N |
P/H | 0.9961 | likely_pathogenic | 0.9977 | pathogenic | -2.654 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
P/I | 0.7873 | likely_pathogenic | 0.8108 | pathogenic | -0.705 | Destabilizing | 0.983 | D | 0.903 | deleterious | None | None | None | None | N |
P/K | 0.9976 | likely_pathogenic | 0.9985 | pathogenic | -1.958 | Destabilizing | 0.983 | D | 0.809 | deleterious | None | None | None | None | N |
P/L | 0.8147 | likely_pathogenic | 0.8701 | pathogenic | -0.705 | Destabilizing | 0.957 | D | 0.865 | deleterious | D | 0.654755663 | None | None | N |
P/M | 0.9615 | likely_pathogenic | 0.975 | pathogenic | -1.013 | Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
P/N | 0.9975 | likely_pathogenic | 0.9985 | pathogenic | -2.454 | Highly Destabilizing | 0.992 | D | 0.882 | deleterious | None | None | None | None | N |
P/Q | 0.991 | likely_pathogenic | 0.9946 | pathogenic | -2.213 | Highly Destabilizing | 0.989 | D | 0.826 | deleterious | D | 0.654755663 | None | None | N |
P/R | 0.9929 | likely_pathogenic | 0.9954 | pathogenic | -1.85 | Destabilizing | 0.978 | D | 0.883 | deleterious | D | 0.654957467 | None | None | N |
P/S | 0.942 | likely_pathogenic | 0.9694 | pathogenic | -2.956 | Highly Destabilizing | 0.865 | D | 0.796 | deleterious | D | 0.654755663 | None | None | N |
P/T | 0.8748 | likely_pathogenic | 0.9123 | pathogenic | -2.571 | Highly Destabilizing | 0.978 | D | 0.809 | deleterious | D | 0.638705942 | None | None | N |
P/V | 0.5228 | ambiguous | 0.5355 | ambiguous | -1.199 | Destabilizing | 0.968 | D | 0.853 | deleterious | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.84 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
P/Y | 0.999 | likely_pathogenic | 0.9995 | pathogenic | -1.501 | Destabilizing | 0.999 | D | 0.924 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.