Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29145 | 87658;87659;87660 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
N2AB | 27504 | 82735;82736;82737 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
N2A | 26577 | 79954;79955;79956 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
N2B | 20080 | 60463;60464;60465 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
Novex-1 | 20205 | 60838;60839;60840 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
Novex-2 | 20272 | 61039;61040;61041 | chr2:178557921;178557920;178557919 | chr2:179422648;179422647;179422646 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | N | 0.681 | 0.343 | 0.56977568999 | gnomAD-4.0.0 | 3.42209E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49713E-06 | 0 | 0 |
V/I | None | None | 0.117 | N | 0.325 | 0.05 | 0.33110744837 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4448 | ambiguous | 0.5238 | ambiguous | -1.304 | Destabilizing | 0.977 | D | 0.681 | prob.neutral | N | 0.494075531 | None | None | N |
V/C | 0.9147 | likely_pathogenic | 0.9154 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
V/D | 0.9855 | likely_pathogenic | 0.9907 | pathogenic | -0.78 | Destabilizing | 0.999 | D | 0.837 | deleterious | N | 0.517206215 | None | None | N |
V/E | 0.9679 | likely_pathogenic | 0.976 | pathogenic | -0.673 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
V/F | 0.6468 | likely_pathogenic | 0.6897 | pathogenic | -0.679 | Destabilizing | 0.993 | D | 0.766 | deleterious | N | 0.482692772 | None | None | N |
V/G | 0.8275 | likely_pathogenic | 0.8642 | pathogenic | -1.73 | Destabilizing | 0.997 | D | 0.836 | deleterious | N | 0.517966684 | None | None | N |
V/H | 0.9898 | likely_pathogenic | 0.9917 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/I | 0.091 | likely_benign | 0.0909 | benign | -0.2 | Destabilizing | 0.117 | N | 0.325 | neutral | N | 0.472346654 | None | None | N |
V/K | 0.9821 | likely_pathogenic | 0.9846 | pathogenic | -1.074 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
V/L | 0.3703 | ambiguous | 0.3767 | ambiguous | -0.2 | Destabilizing | 0.898 | D | 0.675 | prob.neutral | N | 0.458118202 | None | None | N |
V/M | 0.3955 | ambiguous | 0.4137 | ambiguous | -0.32 | Destabilizing | 0.995 | D | 0.781 | deleterious | None | None | None | None | N |
V/N | 0.9586 | likely_pathogenic | 0.9679 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.7513 | likely_pathogenic | 0.8528 | pathogenic | -0.533 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.97 | likely_pathogenic | 0.9757 | pathogenic | -1.011 | Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
V/R | 0.9717 | likely_pathogenic | 0.9742 | pathogenic | -0.884 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.8376 | likely_pathogenic | 0.8719 | pathogenic | -1.741 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
V/T | 0.6119 | likely_pathogenic | 0.6526 | pathogenic | -1.492 | Destabilizing | 0.983 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.9912 | likely_pathogenic | 0.993 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.9632 | likely_pathogenic | 0.9695 | pathogenic | -0.616 | Destabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.