Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29146 | 87661;87662;87663 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
N2AB | 27505 | 82738;82739;82740 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
N2A | 26578 | 79957;79958;79959 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
N2B | 20081 | 60466;60467;60468 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
Novex-1 | 20206 | 60841;60842;60843 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
Novex-2 | 20273 | 61042;61043;61044 | chr2:178557918;178557917;178557916 | chr2:179422645;179422644;179422643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs794729520 | None | 0.317 | N | 0.626 | 0.113 | 0.650379344195 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs794729520 | None | 0.317 | N | 0.626 | 0.113 | 0.650379344195 | gnomAD-4.0.0 | 1.31428E-05 | None | None | None | None | I | None | 4.82532E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1002 | likely_benign | 0.1024 | benign | -0.76 | Destabilizing | None | N | 0.169 | neutral | N | 0.459721287 | None | None | I |
V/C | 0.4639 | ambiguous | 0.4701 | ambiguous | -0.724 | Destabilizing | 0.824 | D | 0.581 | neutral | None | None | None | None | I |
V/D | 0.168 | likely_benign | 0.1792 | benign | -0.462 | Destabilizing | 0.062 | N | 0.546 | neutral | N | 0.438884655 | None | None | I |
V/E | 0.13 | likely_benign | 0.136 | benign | -0.53 | Destabilizing | 0.001 | N | 0.355 | neutral | None | None | None | None | I |
V/F | 0.116 | likely_benign | 0.1144 | benign | -0.69 | Destabilizing | 0.317 | N | 0.626 | neutral | N | 0.495604729 | None | None | I |
V/G | 0.1437 | likely_benign | 0.154 | benign | -0.97 | Destabilizing | 0.062 | N | 0.55 | neutral | N | 0.46545518 | None | None | I |
V/H | 0.271 | likely_benign | 0.2787 | benign | -0.481 | Destabilizing | 0.935 | D | 0.589 | neutral | None | None | None | None | I |
V/I | 0.0684 | likely_benign | 0.0685 | benign | -0.333 | Destabilizing | None | N | 0.207 | neutral | N | 0.465628539 | None | None | I |
V/K | 0.1682 | likely_benign | 0.1667 | benign | -0.753 | Destabilizing | 0.149 | N | 0.541 | neutral | None | None | None | None | I |
V/L | 0.1063 | likely_benign | 0.1067 | benign | -0.333 | Destabilizing | 0.027 | N | 0.4 | neutral | N | 0.448832289 | None | None | I |
V/M | 0.0937 | likely_benign | 0.0941 | benign | -0.394 | Destabilizing | 0.38 | N | 0.545 | neutral | None | None | None | None | I |
V/N | 0.123 | likely_benign | 0.1304 | benign | -0.512 | Destabilizing | 0.38 | N | 0.626 | neutral | None | None | None | None | I |
V/P | 0.6286 | likely_pathogenic | 0.6904 | pathogenic | -0.439 | Destabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | I |
V/Q | 0.1563 | likely_benign | 0.1554 | benign | -0.706 | Destabilizing | 0.38 | N | 0.639 | neutral | None | None | None | None | I |
V/R | 0.1732 | likely_benign | 0.1728 | benign | -0.236 | Destabilizing | 0.38 | N | 0.633 | neutral | None | None | None | None | I |
V/S | 0.1087 | likely_benign | 0.1129 | benign | -0.935 | Destabilizing | 0.081 | N | 0.537 | neutral | None | None | None | None | I |
V/T | 0.098 | likely_benign | 0.0997 | benign | -0.896 | Destabilizing | 0.001 | N | 0.217 | neutral | None | None | None | None | I |
V/W | 0.6125 | likely_pathogenic | 0.6288 | pathogenic | -0.806 | Destabilizing | 0.935 | D | 0.614 | neutral | None | None | None | None | I |
V/Y | 0.3046 | likely_benign | 0.3176 | benign | -0.521 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.