Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29150 | 87673;87674;87675 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
N2AB | 27509 | 82750;82751;82752 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
N2A | 26582 | 79969;79970;79971 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
N2B | 20085 | 60478;60479;60480 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
Novex-1 | 20210 | 60853;60854;60855 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
Novex-2 | 20277 | 61054;61055;61056 | chr2:178557906;178557905;178557904 | chr2:179422633;179422632;179422631 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | None | None | 0.879 | N | 0.591 | 0.393 | 0.77209592603 | gnomAD-4.0.0 | 6.84336E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99426E-07 | 0 | 0 |
I/L | rs189030321 | -0.823 | 0.084 | N | 0.199 | 0.075 | 0.227260227426 | gnomAD-2.1.1 | 3.57E-05 | None | None | None | None | I | None | 0 | 1.13148E-04 | None | 0 | 0 | None | 0 | None | 0 | 3.12E-05 | 2.80899E-04 |
I/L | rs189030321 | -0.823 | 0.084 | N | 0.199 | 0.075 | 0.227260227426 | gnomAD-3.1.2 | 2.49652E-04 | None | None | None | None | I | None | 2.41E-05 | 1.8984E-03 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 1.43267E-03 |
I/L | rs189030321 | -0.823 | 0.084 | N | 0.199 | 0.075 | 0.227260227426 | 1000 genomes | 3.99361E-04 | None | None | None | None | I | None | 0 | 2.9E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
I/L | rs189030321 | -0.823 | 0.084 | N | 0.199 | 0.075 | 0.227260227426 | gnomAD-4.0.0 | 4.52409E-05 | None | None | None | None | I | None | 2.66446E-05 | 6.99767E-04 | None | 0 | 0 | None | 0 | 3.30033E-04 | 1.7799E-05 | 1.09786E-05 | 8.0023E-05 |
I/T | rs373106927 | -1.3 | 0.505 | N | 0.421 | 0.334 | None | gnomAD-2.1.1 | 8.57E-05 | None | None | None | None | I | None | 0 | 1.97997E-04 | None | 1.06321E-03 | 5.12E-05 | None | 0 | None | 0 | 3.12E-05 | 1.40449E-04 |
I/T | rs373106927 | -1.3 | 0.505 | N | 0.421 | 0.334 | None | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 1.72811E-03 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs373106927 | -1.3 | 0.505 | N | 0.421 | 0.334 | None | gnomAD-4.0.0 | 3.96659E-05 | None | None | None | None | I | None | 0 | 1.33329E-04 | None | 1.3173E-03 | 0 | None | 0 | 0 | 8.47558E-06 | 1.09782E-05 | 9.60584E-05 |
I/V | rs189030321 | -1.047 | None | N | 0.098 | 0.083 | 0.171388866994 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs189030321 | -1.047 | None | N | 0.098 | 0.083 | 0.171388866994 | gnomAD-4.0.0 | 6.84344E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3695 | ambiguous | 0.3652 | ambiguous | -1.631 | Destabilizing | 0.218 | N | 0.433 | neutral | None | None | None | None | I |
I/C | 0.6127 | likely_pathogenic | 0.6179 | pathogenic | -1.399 | Destabilizing | 0.973 | D | 0.481 | neutral | None | None | None | None | I |
I/D | 0.7762 | likely_pathogenic | 0.7881 | pathogenic | -1.041 | Destabilizing | 0.906 | D | 0.609 | neutral | None | None | None | None | I |
I/E | 0.6503 | likely_pathogenic | 0.633 | pathogenic | -1.031 | Destabilizing | 0.906 | D | 0.586 | neutral | None | None | None | None | I |
I/F | 0.2372 | likely_benign | 0.2642 | benign | -1.312 | Destabilizing | 0.826 | D | 0.469 | neutral | None | None | None | None | I |
I/G | 0.6972 | likely_pathogenic | 0.7261 | pathogenic | -1.944 | Destabilizing | 0.906 | D | 0.542 | neutral | None | None | None | None | I |
I/H | 0.6569 | likely_pathogenic | 0.6598 | pathogenic | -1.259 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | I |
I/K | 0.468 | ambiguous | 0.4482 | ambiguous | -0.997 | Destabilizing | 0.879 | D | 0.591 | neutral | N | 0.486563958 | None | None | I |
I/L | 0.1574 | likely_benign | 0.1741 | benign | -0.845 | Destabilizing | 0.084 | N | 0.199 | neutral | N | 0.463071023 | None | None | I |
I/M | 0.1281 | likely_benign | 0.1352 | benign | -0.811 | Destabilizing | 0.782 | D | 0.521 | neutral | D | 0.52533299 | None | None | I |
I/N | 0.408 | ambiguous | 0.3932 | ambiguous | -0.863 | Destabilizing | 0.967 | D | 0.601 | neutral | None | None | None | None | I |
I/P | 0.803 | likely_pathogenic | 0.8187 | pathogenic | -1.077 | Destabilizing | 0.967 | D | 0.605 | neutral | None | None | None | None | I |
I/Q | 0.5407 | ambiguous | 0.5278 | ambiguous | -1.052 | Destabilizing | 0.967 | D | 0.608 | neutral | None | None | None | None | I |
I/R | 0.407 | ambiguous | 0.3915 | ambiguous | -0.522 | Destabilizing | 0.879 | D | 0.602 | neutral | N | 0.495010083 | None | None | I |
I/S | 0.3874 | ambiguous | 0.3734 | ambiguous | -1.546 | Destabilizing | 0.826 | D | 0.503 | neutral | None | None | None | None | I |
I/T | 0.2067 | likely_benign | 0.1902 | benign | -1.414 | Destabilizing | 0.505 | D | 0.421 | neutral | N | 0.476885682 | None | None | I |
I/V | 0.0547 | likely_benign | 0.0566 | benign | -1.077 | Destabilizing | None | N | 0.098 | neutral | N | 0.356228773 | None | None | I |
I/W | 0.8824 | likely_pathogenic | 0.8918 | pathogenic | -1.344 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | I |
I/Y | 0.6277 | likely_pathogenic | 0.6469 | pathogenic | -1.076 | Destabilizing | 0.906 | D | 0.517 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.