Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29151 | 87676;87677;87678 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
N2AB | 27510 | 82753;82754;82755 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
N2A | 26583 | 79972;79973;79974 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
N2B | 20086 | 60481;60482;60483 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
Novex-1 | 20211 | 60856;60857;60858 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
Novex-2 | 20278 | 61057;61058;61059 | chr2:178557903;178557902;178557901 | chr2:179422630;179422629;179422628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.971 | N | 0.524 | 0.439 | 0.357724736475 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1644 | likely_benign | 0.1911 | benign | -0.846 | Destabilizing | 0.489 | N | 0.493 | neutral | N | 0.478084416 | None | None | N |
T/C | 0.5287 | ambiguous | 0.537 | ambiguous | -0.614 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
T/D | 0.4635 | ambiguous | 0.5088 | ambiguous | -0.393 | Destabilizing | 0.754 | D | 0.481 | neutral | None | None | None | None | N |
T/E | 0.577 | likely_pathogenic | 0.6599 | pathogenic | -0.372 | Destabilizing | 0.86 | D | 0.481 | neutral | None | None | None | None | N |
T/F | 0.5955 | likely_pathogenic | 0.6609 | pathogenic | -0.825 | Destabilizing | 0.978 | D | 0.59 | neutral | None | None | None | None | N |
T/G | 0.2143 | likely_benign | 0.2396 | benign | -1.127 | Destabilizing | 0.754 | D | 0.471 | neutral | None | None | None | None | N |
T/H | 0.4294 | ambiguous | 0.4869 | ambiguous | -1.378 | Destabilizing | 0.994 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.6728 | likely_pathogenic | 0.739 | pathogenic | -0.184 | Destabilizing | 0.971 | D | 0.524 | neutral | N | 0.504533237 | None | None | N |
T/K | 0.3788 | ambiguous | 0.4552 | ambiguous | -0.757 | Destabilizing | 0.754 | D | 0.482 | neutral | None | None | None | None | N |
T/L | 0.2114 | likely_benign | 0.2635 | benign | -0.184 | Destabilizing | 0.86 | D | 0.478 | neutral | None | None | None | None | N |
T/M | 0.1458 | likely_benign | 0.1787 | benign | 0.061 | Stabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
T/N | 0.1601 | likely_benign | 0.1686 | benign | -0.779 | Destabilizing | 0.126 | N | 0.274 | neutral | N | 0.510998256 | None | None | N |
T/P | 0.6701 | likely_pathogenic | 0.7608 | pathogenic | -0.372 | Destabilizing | 0.971 | D | 0.523 | neutral | N | 0.519510393 | None | None | N |
T/Q | 0.3699 | ambiguous | 0.425 | ambiguous | -0.932 | Destabilizing | 0.956 | D | 0.529 | neutral | None | None | None | None | N |
T/R | 0.3308 | likely_benign | 0.3958 | ambiguous | -0.543 | Destabilizing | 0.956 | D | 0.525 | neutral | None | None | None | None | N |
T/S | 0.0945 | likely_benign | 0.0973 | benign | -1.063 | Destabilizing | 0.058 | N | 0.267 | neutral | N | 0.444407905 | None | None | N |
T/V | 0.4581 | ambiguous | 0.5274 | ambiguous | -0.372 | Destabilizing | 0.86 | D | 0.503 | neutral | None | None | None | None | N |
T/W | 0.8483 | likely_pathogenic | 0.8678 | pathogenic | -0.749 | Destabilizing | 0.998 | D | 0.596 | neutral | None | None | None | None | N |
T/Y | 0.6148 | likely_pathogenic | 0.6613 | pathogenic | -0.511 | Destabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.