Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29152 | 87679;87680;87681 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
N2AB | 27511 | 82756;82757;82758 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
N2A | 26584 | 79975;79976;79977 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
N2B | 20087 | 60484;60485;60486 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
Novex-1 | 20212 | 60859;60860;60861 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
Novex-2 | 20279 | 61060;61061;61062 | chr2:178557900;178557899;178557898 | chr2:179422627;179422626;179422625 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs752325107 | 0.163 | 0.928 | N | 0.473 | 0.244 | 0.297375071883 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.66945E-04 | None | 0 | None | 0 | 0 | 0 |
E/K | rs752325107 | 0.163 | 0.928 | N | 0.473 | 0.244 | 0.297375071883 | gnomAD-4.0.0 | 1.59191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1531 | likely_benign | 0.1592 | benign | -0.515 | Destabilizing | 0.039 | N | 0.377 | neutral | N | 0.38618632 | None | None | N |
E/C | 0.8712 | likely_pathogenic | 0.8823 | pathogenic | 0.051 | Stabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
E/D | 0.2441 | likely_benign | 0.2785 | benign | -0.445 | Destabilizing | 0.963 | D | 0.393 | neutral | N | 0.455739619 | None | None | N |
E/F | 0.9284 | likely_pathogenic | 0.9361 | pathogenic | -0.459 | Destabilizing | 0.992 | D | 0.792 | deleterious | None | None | None | None | N |
E/G | 0.1923 | likely_benign | 0.2012 | benign | -0.73 | Destabilizing | 0.865 | D | 0.615 | neutral | N | 0.448640288 | None | None | N |
E/H | 0.6608 | likely_pathogenic | 0.6943 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
E/I | 0.6233 | likely_pathogenic | 0.6655 | pathogenic | 0.023 | Stabilizing | 0.983 | D | 0.772 | deleterious | None | None | None | None | N |
E/K | 0.1907 | likely_benign | 0.2104 | benign | 0.314 | Stabilizing | 0.928 | D | 0.473 | neutral | N | 0.442522393 | None | None | N |
E/L | 0.6199 | likely_pathogenic | 0.6554 | pathogenic | 0.023 | Stabilizing | 0.968 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/M | 0.6196 | likely_pathogenic | 0.653 | pathogenic | 0.293 | Stabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/N | 0.4062 | ambiguous | 0.4513 | ambiguous | -0.002 | Destabilizing | 0.992 | D | 0.668 | neutral | None | None | None | None | N |
E/P | 0.5403 | ambiguous | 0.574 | pathogenic | -0.136 | Destabilizing | 0.992 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/Q | 0.1872 | likely_benign | 0.1959 | benign | 0.021 | Stabilizing | 0.989 | D | 0.623 | neutral | N | 0.502301415 | None | None | N |
E/R | 0.3425 | ambiguous | 0.358 | ambiguous | 0.41 | Stabilizing | 0.983 | D | 0.669 | neutral | None | None | None | None | N |
E/S | 0.2362 | likely_benign | 0.2461 | benign | -0.174 | Destabilizing | 0.895 | D | 0.465 | neutral | None | None | None | None | N |
E/T | 0.3151 | likely_benign | 0.348 | ambiguous | 0.003 | Stabilizing | 0.983 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.3667 | ambiguous | 0.3995 | ambiguous | -0.136 | Destabilizing | 0.957 | D | 0.665 | neutral | N | 0.486659959 | None | None | N |
E/W | 0.9619 | likely_pathogenic | 0.9661 | pathogenic | -0.302 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
E/Y | 0.8292 | likely_pathogenic | 0.8481 | pathogenic | -0.207 | Destabilizing | 0.997 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.