Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29153 | 87682;87683;87684 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
N2AB | 27512 | 82759;82760;82761 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
N2A | 26585 | 79978;79979;79980 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
N2B | 20088 | 60487;60488;60489 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
Novex-1 | 20213 | 60862;60863;60864 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
Novex-2 | 20280 | 61063;61064;61065 | chr2:178557897;178557896;178557895 | chr2:179422624;179422623;179422622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.117 | N | 0.419 | 0.195 | 0.26169431596 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1409902738 | 0.039 | 0.062 | N | 0.449 | 0.137 | 0.180583059064 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/K | rs1409902738 | 0.039 | 0.062 | N | 0.449 | 0.137 | 0.180583059064 | gnomAD-4.0.0 | 1.36858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99428E-07 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1599 | likely_benign | 0.1917 | benign | -0.854 | Destabilizing | 0.062 | N | 0.408 | neutral | N | 0.499125037 | None | None | N |
E/C | 0.7941 | likely_pathogenic | 0.8409 | pathogenic | -0.192 | Destabilizing | 0.935 | D | 0.573 | neutral | None | None | None | None | N |
E/D | 0.0664 | likely_benign | 0.0816 | benign | -0.62 | Destabilizing | None | N | 0.083 | neutral | N | 0.362808028 | None | None | N |
E/F | 0.7542 | likely_pathogenic | 0.8085 | pathogenic | -0.618 | Destabilizing | 0.791 | D | 0.479 | neutral | None | None | None | None | N |
E/G | 0.1548 | likely_benign | 0.1713 | benign | -1.111 | Destabilizing | 0.117 | N | 0.419 | neutral | N | 0.481808713 | None | None | N |
E/H | 0.5172 | ambiguous | 0.5698 | pathogenic | -0.686 | Destabilizing | 0.555 | D | 0.393 | neutral | None | None | None | None | N |
E/I | 0.4791 | ambiguous | 0.553 | ambiguous | -0.179 | Destabilizing | 0.555 | D | 0.475 | neutral | None | None | None | None | N |
E/K | 0.2871 | likely_benign | 0.3105 | benign | -0.01 | Destabilizing | 0.062 | N | 0.449 | neutral | N | 0.48486766 | None | None | N |
E/L | 0.4822 | ambiguous | 0.5499 | ambiguous | -0.179 | Destabilizing | 0.38 | N | 0.411 | neutral | None | None | None | None | N |
E/M | 0.4921 | ambiguous | 0.5624 | ambiguous | 0.202 | Stabilizing | 0.824 | D | 0.44 | neutral | None | None | None | None | N |
E/N | 0.1483 | likely_benign | 0.1903 | benign | -0.401 | Destabilizing | 0.081 | N | 0.432 | neutral | None | None | None | None | N |
E/P | 0.886 | likely_pathogenic | 0.9255 | pathogenic | -0.384 | Destabilizing | 0.555 | D | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.2003 | likely_benign | 0.2117 | benign | -0.363 | Destabilizing | 0.002 | N | 0.221 | neutral | N | 0.505859008 | None | None | N |
E/R | 0.4566 | ambiguous | 0.4689 | ambiguous | 0.15 | Stabilizing | 0.235 | N | 0.394 | neutral | None | None | None | None | N |
E/S | 0.1632 | likely_benign | 0.1981 | benign | -0.622 | Destabilizing | 0.081 | N | 0.397 | neutral | None | None | None | None | N |
E/T | 0.1801 | likely_benign | 0.2179 | benign | -0.407 | Destabilizing | 0.149 | N | 0.435 | neutral | None | None | None | None | N |
E/V | 0.2899 | likely_benign | 0.3378 | benign | -0.384 | Destabilizing | 0.317 | N | 0.394 | neutral | N | 0.468241686 | None | None | N |
E/W | 0.9064 | likely_pathogenic | 0.9259 | pathogenic | -0.37 | Destabilizing | 0.935 | D | 0.627 | neutral | None | None | None | None | N |
E/Y | 0.5478 | ambiguous | 0.6115 | pathogenic | -0.352 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.