Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29157 | 87694;87695;87696 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
N2AB | 27516 | 82771;82772;82773 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
N2A | 26589 | 79990;79991;79992 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
N2B | 20092 | 60499;60500;60501 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
Novex-1 | 20217 | 60874;60875;60876 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
Novex-2 | 20284 | 61075;61076;61077 | chr2:178557885;178557884;178557883 | chr2:179422612;179422611;179422610 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1311609495 | -1.813 | 0.999 | N | 0.753 | 0.467 | 0.734502758406 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/F | rs1311609495 | -1.813 | 0.999 | N | 0.753 | 0.467 | 0.734502758406 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8578E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8578 | likely_pathogenic | 0.8812 | pathogenic | -2.749 | Highly Destabilizing | 0.997 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/C | 0.7419 | likely_pathogenic | 0.7688 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -3.505 | Highly Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
L/E | 0.995 | likely_pathogenic | 0.9952 | pathogenic | -3.17 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/F | 0.3335 | likely_benign | 0.4107 | ambiguous | -1.689 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.52187484 | None | None | N |
L/G | 0.9811 | likely_pathogenic | 0.9842 | pathogenic | -3.372 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/H | 0.9838 | likely_pathogenic | 0.9869 | pathogenic | -3.129 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.559350797 | None | None | N |
L/I | 0.1044 | likely_benign | 0.1094 | benign | -0.869 | Destabilizing | 0.992 | D | 0.615 | neutral | N | 0.51558293 | None | None | N |
L/K | 0.993 | likely_pathogenic | 0.9934 | pathogenic | -2.214 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/M | 0.1688 | likely_benign | 0.1871 | benign | -0.961 | Destabilizing | 0.985 | D | 0.533 | neutral | None | None | None | None | N |
L/N | 0.9958 | likely_pathogenic | 0.9964 | pathogenic | -2.979 | Highly Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
L/P | 0.9932 | likely_pathogenic | 0.9945 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.927 | deleterious | D | 0.559350797 | None | None | N |
L/Q | 0.9735 | likely_pathogenic | 0.9779 | pathogenic | -2.589 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
L/R | 0.9829 | likely_pathogenic | 0.9851 | pathogenic | -2.307 | Highly Destabilizing | 0.999 | D | 0.896 | deleterious | D | 0.559350797 | None | None | N |
L/S | 0.9812 | likely_pathogenic | 0.9857 | pathogenic | -3.514 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/T | 0.9341 | likely_pathogenic | 0.9452 | pathogenic | -3.007 | Highly Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
L/V | 0.1029 | likely_benign | 0.1133 | benign | -1.487 | Destabilizing | 0.992 | D | 0.642 | neutral | N | 0.51684958 | None | None | N |
L/W | 0.9167 | likely_pathogenic | 0.934 | pathogenic | -2.118 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/Y | 0.9379 | likely_pathogenic | 0.9528 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.