Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29158 | 87697;87698;87699 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
N2AB | 27517 | 82774;82775;82776 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
N2A | 26590 | 79993;79994;79995 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
N2B | 20093 | 60502;60503;60504 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
Novex-1 | 20218 | 60877;60878;60879 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
Novex-2 | 20285 | 61078;61079;61080 | chr2:178557882;178557881;178557880 | chr2:179422609;179422608;179422607 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs759043788 | -0.671 | 0.036 | N | 0.373 | 0.112 | 0.15556083564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs759043788 | -0.671 | 0.036 | N | 0.373 | 0.112 | 0.15556083564 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2471 | likely_benign | 0.2568 | benign | -0.856 | Destabilizing | 0.25 | N | 0.439 | neutral | None | None | None | None | N |
K/C | 0.3872 | ambiguous | 0.4102 | ambiguous | -0.839 | Destabilizing | 0.992 | D | 0.666 | neutral | None | None | None | None | N |
K/D | 0.5635 | ambiguous | 0.5901 | pathogenic | 0.169 | Stabilizing | 0.447 | N | 0.487 | neutral | None | None | None | None | N |
K/E | 0.1751 | likely_benign | 0.1886 | benign | 0.319 | Stabilizing | 0.379 | N | 0.398 | neutral | N | 0.451043088 | None | None | N |
K/F | 0.5821 | likely_pathogenic | 0.5831 | pathogenic | -0.466 | Destabilizing | 0.85 | D | 0.644 | neutral | None | None | None | None | N |
K/G | 0.3837 | ambiguous | 0.3889 | ambiguous | -1.238 | Destabilizing | 0.617 | D | 0.529 | neutral | None | None | None | None | N |
K/H | 0.1673 | likely_benign | 0.1737 | benign | -1.397 | Destabilizing | 0.92 | D | 0.601 | neutral | None | None | None | None | N |
K/I | 0.247 | likely_benign | 0.2635 | benign | 0.152 | Stabilizing | 0.681 | D | 0.623 | neutral | N | 0.515249282 | None | None | N |
K/L | 0.2126 | likely_benign | 0.2247 | benign | 0.152 | Stabilizing | 0.447 | N | 0.539 | neutral | None | None | None | None | N |
K/M | 0.1518 | likely_benign | 0.1576 | benign | -0.051 | Destabilizing | 0.25 | N | 0.458 | neutral | None | None | None | None | N |
K/N | 0.3049 | likely_benign | 0.3195 | benign | -0.459 | Destabilizing | 0.036 | N | 0.383 | neutral | N | 0.472477153 | None | None | N |
K/P | 0.9396 | likely_pathogenic | 0.9461 | pathogenic | -0.155 | Destabilizing | 0.92 | D | 0.589 | neutral | None | None | None | None | N |
K/Q | 0.0838 | likely_benign | 0.0888 | benign | -0.48 | Destabilizing | 0.036 | N | 0.373 | neutral | N | 0.432804044 | None | None | N |
K/R | 0.0714 | likely_benign | 0.0736 | benign | -0.434 | Destabilizing | 0.004 | N | 0.407 | neutral | N | 0.475728102 | None | None | N |
K/S | 0.2329 | likely_benign | 0.2487 | benign | -1.274 | Destabilizing | 0.447 | N | 0.395 | neutral | None | None | None | None | N |
K/T | 0.1066 | likely_benign | 0.1125 | benign | -0.897 | Destabilizing | 0.004 | N | 0.407 | neutral | N | 0.434265482 | None | None | N |
K/V | 0.2318 | likely_benign | 0.2512 | benign | -0.155 | Destabilizing | 0.447 | N | 0.535 | neutral | None | None | None | None | N |
K/W | 0.5941 | likely_pathogenic | 0.6071 | pathogenic | -0.266 | Destabilizing | 0.992 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/Y | 0.4407 | ambiguous | 0.4419 | ambiguous | 0.02 | Stabilizing | 0.972 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.