Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29161 | 87706;87707;87708 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
N2AB | 27520 | 82783;82784;82785 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
N2A | 26593 | 80002;80003;80004 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
N2B | 20096 | 60511;60512;60513 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
Novex-1 | 20221 | 60886;60887;60888 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
Novex-2 | 20288 | 61087;61088;61089 | chr2:178557873;178557872;178557871 | chr2:179422600;179422599;179422598 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.767 | N | 0.374 | 0.335 | 0.283761946502 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0706 | likely_benign | 0.0745 | benign | -1.667 | Destabilizing | 0.767 | D | 0.374 | neutral | N | 0.503418923 | None | None | N |
P/C | 0.4813 | ambiguous | 0.5304 | ambiguous | -1.129 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
P/D | 0.6973 | likely_pathogenic | 0.6809 | pathogenic | -1.734 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/E | 0.3598 | ambiguous | 0.3765 | ambiguous | -1.664 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/F | 0.556 | ambiguous | 0.586 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/G | 0.4134 | ambiguous | 0.424 | ambiguous | -2.05 | Highly Destabilizing | 0.997 | D | 0.741 | deleterious | None | None | None | None | N |
P/H | 0.3117 | likely_benign | 0.3357 | benign | -1.568 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
P/I | 0.2489 | likely_benign | 0.2798 | benign | -0.68 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/K | 0.318 | likely_benign | 0.3567 | ambiguous | -1.493 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/L | 0.1096 | likely_benign | 0.1226 | benign | -0.68 | Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.51995492 | None | None | N |
P/M | 0.2287 | likely_benign | 0.2549 | benign | -0.561 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/N | 0.4558 | ambiguous | 0.4537 | ambiguous | -1.403 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/Q | 0.1804 | likely_benign | 0.1977 | benign | -1.472 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.496508294 | None | None | N |
P/R | 0.2672 | likely_benign | 0.3147 | benign | -1.032 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.494520058 | None | None | N |
P/S | 0.1692 | likely_benign | 0.1699 | benign | -1.925 | Destabilizing | 0.998 | D | 0.745 | deleterious | N | 0.495747826 | None | None | N |
P/T | 0.1363 | likely_benign | 0.1456 | benign | -1.729 | Destabilizing | 0.999 | D | 0.775 | deleterious | N | 0.509990967 | None | None | N |
P/V | 0.1787 | likely_benign | 0.1983 | benign | -0.976 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
P/W | 0.8031 | likely_pathogenic | 0.8313 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/Y | 0.5416 | ambiguous | 0.5873 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.