Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29179 | 87760;87761;87762 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
N2AB | 27538 | 82837;82838;82839 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
N2A | 26611 | 80056;80057;80058 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
N2B | 20114 | 60565;60566;60567 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
Novex-1 | 20239 | 60940;60941;60942 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
Novex-2 | 20306 | 61141;61142;61143 | chr2:178557819;178557818;178557817 | chr2:179422546;179422545;179422544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.629 | 0.568 | 0.384584525793 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | None | None | 0.999 | N | 0.463 | 0.193 | 0.272205846399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2653 | likely_benign | 0.3026 | benign | -0.945 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.478827977 | None | None | N |
E/C | 0.915 | likely_pathogenic | 0.9308 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/D | 0.1936 | likely_benign | 0.201 | benign | -1.148 | Destabilizing | 0.999 | D | 0.463 | neutral | N | 0.406236305 | None | None | N |
E/F | 0.9486 | likely_pathogenic | 0.9566 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/G | 0.3394 | likely_benign | 0.357 | ambiguous | -1.289 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.483133618 | None | None | N |
E/H | 0.7715 | likely_pathogenic | 0.8045 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/I | 0.6895 | likely_pathogenic | 0.75 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.3457 | ambiguous | 0.3943 | ambiguous | -0.556 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.484926376 | None | None | N |
E/L | 0.6422 | likely_pathogenic | 0.6946 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/M | 0.6804 | likely_pathogenic | 0.7224 | pathogenic | 0.515 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/N | 0.4201 | ambiguous | 0.4548 | ambiguous | -1.0 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/P | 0.6324 | likely_pathogenic | 0.7271 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Q | 0.2506 | likely_benign | 0.2769 | benign | -0.893 | Destabilizing | 1.0 | D | 0.599 | neutral | N | 0.521020462 | None | None | N |
E/R | 0.5725 | likely_pathogenic | 0.6199 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/S | 0.4057 | ambiguous | 0.446 | ambiguous | -1.299 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
E/T | 0.5052 | ambiguous | 0.5663 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/V | 0.4494 | ambiguous | 0.5156 | ambiguous | -0.302 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.485108628 | None | None | N |
E/W | 0.9832 | likely_pathogenic | 0.9848 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/Y | 0.9126 | likely_pathogenic | 0.9254 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.