Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29186 | 87781;87782;87783 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
N2AB | 27545 | 82858;82859;82860 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
N2A | 26618 | 80077;80078;80079 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
N2B | 20121 | 60586;60587;60588 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
Novex-1 | 20246 | 60961;60962;60963 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
Novex-2 | 20313 | 61162;61163;61164 | chr2:178557798;178557797;178557796 | chr2:179422525;179422524;179422523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs755409023 | None | None | N | 0.175 | 0.125 | 0.273938319068 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0727 | likely_benign | 0.0796 | benign | -0.538 | Destabilizing | None | N | 0.089 | neutral | N | 0.466916618 | None | None | N |
T/C | 0.2261 | likely_benign | 0.254 | benign | -0.433 | Destabilizing | 0.356 | N | 0.336 | neutral | None | None | None | None | N |
T/D | 0.2972 | likely_benign | 0.3614 | ambiguous | 0.268 | Stabilizing | 0.038 | N | 0.322 | neutral | None | None | None | None | N |
T/E | 0.2073 | likely_benign | 0.2532 | benign | 0.264 | Stabilizing | 0.038 | N | 0.316 | neutral | None | None | None | None | N |
T/F | 0.198 | likely_benign | 0.2214 | benign | -0.702 | Destabilizing | 0.072 | N | 0.361 | neutral | None | None | None | None | N |
T/G | 0.1692 | likely_benign | 0.2015 | benign | -0.768 | Destabilizing | 0.016 | N | 0.292 | neutral | None | None | None | None | N |
T/H | 0.1764 | likely_benign | 0.201 | benign | -0.937 | Destabilizing | 0.356 | N | 0.328 | neutral | None | None | None | None | N |
T/I | 0.118 | likely_benign | 0.1372 | benign | -0.03 | Destabilizing | None | N | 0.175 | neutral | N | 0.456123621 | None | None | N |
T/K | 0.1762 | likely_benign | 0.2002 | benign | -0.483 | Destabilizing | 0.038 | N | 0.321 | neutral | None | None | None | None | N |
T/L | 0.082 | likely_benign | 0.0841 | benign | -0.03 | Destabilizing | 0.007 | N | 0.238 | neutral | None | None | None | None | N |
T/M | 0.0715 | likely_benign | 0.071 | benign | -0.061 | Destabilizing | 0.003 | N | 0.219 | neutral | None | None | None | None | N |
T/N | 0.0858 | likely_benign | 0.0963 | benign | -0.454 | Destabilizing | 0.029 | N | 0.223 | neutral | N | 0.48615574 | None | None | N |
T/P | 0.5275 | ambiguous | 0.5818 | pathogenic | -0.167 | Destabilizing | 0.055 | N | 0.372 | neutral | N | 0.470065338 | None | None | N |
T/Q | 0.1583 | likely_benign | 0.1814 | benign | -0.539 | Destabilizing | 0.072 | N | 0.371 | neutral | None | None | None | None | N |
T/R | 0.1601 | likely_benign | 0.169 | benign | -0.282 | Destabilizing | 0.072 | N | 0.371 | neutral | None | None | None | None | N |
T/S | 0.086 | likely_benign | 0.0939 | benign | -0.728 | Destabilizing | None | N | 0.099 | neutral | N | 0.43295876 | None | None | N |
T/V | 0.0948 | likely_benign | 0.1052 | benign | -0.167 | Destabilizing | 0.007 | N | 0.167 | neutral | None | None | None | None | N |
T/W | 0.4624 | ambiguous | 0.4893 | ambiguous | -0.706 | Destabilizing | 0.864 | D | 0.326 | neutral | None | None | None | None | N |
T/Y | 0.2121 | likely_benign | 0.2362 | benign | -0.43 | Destabilizing | 0.356 | N | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.