Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29187 | 87784;87785;87786 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
N2AB | 27546 | 82861;82862;82863 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
N2A | 26619 | 80080;80081;80082 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
N2B | 20122 | 60589;60590;60591 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
Novex-1 | 20247 | 60964;60965;60966 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
Novex-2 | 20314 | 61165;61166;61167 | chr2:178557795;178557794;178557793 | chr2:179422522;179422521;179422520 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.104 | N | 0.209 | 0.069 | 0.112648838833 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs1060500586 | 0.233 | 0.994 | N | 0.582 | 0.377 | 0.357519025918 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1060500586 | 0.233 | 0.994 | N | 0.582 | 0.377 | 0.357519025918 | gnomAD-4.0.0 | 6.15749E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.04345E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2412 | likely_benign | 0.3095 | benign | -0.631 | Destabilizing | 0.994 | D | 0.653 | neutral | N | 0.450163228 | None | None | I |
E/C | 0.9331 | likely_pathogenic | 0.951 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
E/D | 0.2715 | likely_benign | 0.3469 | ambiguous | -0.526 | Destabilizing | 0.104 | N | 0.209 | neutral | N | 0.439831591 | None | None | I |
E/F | 0.9404 | likely_pathogenic | 0.9596 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/G | 0.4122 | ambiguous | 0.5169 | ambiguous | -0.878 | Destabilizing | 0.994 | D | 0.638 | neutral | N | 0.502304202 | None | None | I |
E/H | 0.7762 | likely_pathogenic | 0.8448 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/I | 0.5123 | ambiguous | 0.5896 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
E/K | 0.3357 | likely_benign | 0.4308 | ambiguous | 0.175 | Stabilizing | 0.994 | D | 0.582 | neutral | N | 0.425208855 | None | None | I |
E/L | 0.5935 | likely_pathogenic | 0.6652 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
E/M | 0.5867 | likely_pathogenic | 0.6621 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/N | 0.4469 | ambiguous | 0.5701 | pathogenic | -0.32 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/P | 0.5404 | ambiguous | 0.6079 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
E/Q | 0.2583 | likely_benign | 0.3238 | benign | -0.253 | Destabilizing | 0.998 | D | 0.643 | neutral | N | 0.456550483 | None | None | I |
E/R | 0.5578 | ambiguous | 0.6532 | pathogenic | 0.397 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/S | 0.3738 | ambiguous | 0.4852 | ambiguous | -0.479 | Destabilizing | 0.992 | D | 0.594 | neutral | None | None | None | None | I |
E/T | 0.3293 | likely_benign | 0.4207 | ambiguous | -0.269 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | I |
E/V | 0.2801 | likely_benign | 0.3304 | benign | -0.185 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.402409353 | None | None | I |
E/W | 0.9837 | likely_pathogenic | 0.9897 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.8797 | likely_pathogenic | 0.9202 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.