Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29189 | 87790;87791;87792 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
N2AB | 27548 | 82867;82868;82869 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
N2A | 26621 | 80086;80087;80088 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
N2B | 20124 | 60595;60596;60597 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
Novex-1 | 20249 | 60970;60971;60972 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
Novex-2 | 20316 | 61171;61172;61173 | chr2:178557789;178557788;178557787 | chr2:179422516;179422515;179422514 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1319240179 | -0.653 | 0.999 | N | 0.74 | 0.452 | 0.791748981498 | gnomAD-4.0.0 | 7.95499E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 7.16353E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1242 | likely_benign | 0.1234 | benign | -0.495 | Destabilizing | 0.543 | D | 0.273 | neutral | N | 0.482715577 | None | None | N |
S/C | 0.1433 | likely_benign | 0.1509 | benign | -0.446 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.482906582 | None | None | N |
S/D | 0.9589 | likely_pathogenic | 0.9647 | pathogenic | -0.082 | Destabilizing | 0.996 | D | 0.596 | neutral | None | None | None | None | N |
S/E | 0.9704 | likely_pathogenic | 0.9724 | pathogenic | -0.093 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | N |
S/F | 0.6892 | likely_pathogenic | 0.6832 | pathogenic | -0.712 | Destabilizing | 0.999 | D | 0.74 | deleterious | N | 0.504516329 | None | None | N |
S/G | 0.2527 | likely_benign | 0.2737 | benign | -0.735 | Destabilizing | 0.992 | D | 0.474 | neutral | None | None | None | None | N |
S/H | 0.8627 | likely_pathogenic | 0.867 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/I | 0.6258 | likely_pathogenic | 0.6292 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/K | 0.9892 | likely_pathogenic | 0.9896 | pathogenic | -0.644 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | N |
S/L | 0.2138 | likely_benign | 0.2184 | benign | 0.026 | Stabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
S/M | 0.4122 | ambiguous | 0.407 | ambiguous | 0.167 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/N | 0.5498 | ambiguous | 0.6008 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
S/P | 0.939 | likely_pathogenic | 0.9665 | pathogenic | -0.113 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | N | 0.480905119 | None | None | N |
S/Q | 0.9209 | likely_pathogenic | 0.9216 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/R | 0.9799 | likely_pathogenic | 0.9813 | pathogenic | -0.548 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/T | 0.183 | likely_benign | 0.1847 | benign | -0.606 | Destabilizing | 0.989 | D | 0.463 | neutral | N | 0.46449225 | None | None | N |
S/V | 0.4839 | ambiguous | 0.4887 | ambiguous | -0.113 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
S/W | 0.8211 | likely_pathogenic | 0.8238 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/Y | 0.6551 | likely_pathogenic | 0.6582 | pathogenic | -0.443 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.469321777 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.