Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29191 | 87796;87797;87798 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
N2AB | 27550 | 82873;82874;82875 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
N2A | 26623 | 80092;80093;80094 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
N2B | 20126 | 60601;60602;60603 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
Novex-1 | 20251 | 60976;60977;60978 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
Novex-2 | 20318 | 61177;61178;61179 | chr2:178557783;178557782;178557781 | chr2:179422510;179422509;179422508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs963739938 | None | 0.011 | N | 0.139 | 0.081 | 0.154104182512 | gnomAD-4.0.0 | 6.84162E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99429E-06 | 0 | 0 |
T/I | rs757571814 | 0.024 | 0.968 | N | 0.512 | 0.349 | 0.541330971987 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
T/I | rs757571814 | 0.024 | 0.968 | N | 0.512 | 0.349 | 0.541330971987 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85786E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0724 | likely_benign | 0.0832 | benign | -0.313 | Destabilizing | 0.011 | N | 0.139 | neutral | N | 0.471034358 | None | None | I |
T/C | 0.5462 | ambiguous | 0.6134 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
T/D | 0.8277 | likely_pathogenic | 0.8472 | pathogenic | 0.033 | Stabilizing | 0.988 | D | 0.513 | neutral | None | None | None | None | I |
T/E | 0.7938 | likely_pathogenic | 0.8206 | pathogenic | -0.061 | Destabilizing | 0.919 | D | 0.515 | neutral | None | None | None | None | I |
T/F | 0.5958 | likely_pathogenic | 0.6313 | pathogenic | -0.901 | Destabilizing | 0.988 | D | 0.597 | neutral | None | None | None | None | I |
T/G | 0.2936 | likely_benign | 0.3393 | benign | -0.406 | Destabilizing | 0.851 | D | 0.48 | neutral | None | None | None | None | I |
T/H | 0.6099 | likely_pathogenic | 0.6316 | pathogenic | -0.698 | Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | I |
T/I | 0.5781 | likely_pathogenic | 0.6352 | pathogenic | -0.191 | Destabilizing | 0.968 | D | 0.512 | neutral | N | 0.469838302 | None | None | I |
T/K | 0.6967 | likely_pathogenic | 0.6793 | pathogenic | -0.276 | Destabilizing | 0.896 | D | 0.518 | neutral | N | 0.510475394 | None | None | I |
T/L | 0.2174 | likely_benign | 0.2421 | benign | -0.191 | Destabilizing | 0.919 | D | 0.523 | neutral | None | None | None | None | I |
T/M | 0.1285 | likely_benign | 0.1443 | benign | 0.068 | Stabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
T/N | 0.2815 | likely_benign | 0.3075 | benign | -0.033 | Destabilizing | 0.988 | D | 0.497 | neutral | None | None | None | None | I |
T/P | 0.3549 | ambiguous | 0.5112 | ambiguous | -0.205 | Destabilizing | 0.984 | D | 0.516 | neutral | N | 0.505258788 | None | None | I |
T/Q | 0.55 | ambiguous | 0.5689 | pathogenic | -0.315 | Destabilizing | 0.988 | D | 0.555 | neutral | None | None | None | None | I |
T/R | 0.5966 | likely_pathogenic | 0.5983 | pathogenic | 0.034 | Stabilizing | 0.984 | D | 0.547 | neutral | N | 0.505397648 | None | None | I |
T/S | 0.1473 | likely_benign | 0.1736 | benign | -0.224 | Destabilizing | 0.64 | D | 0.511 | neutral | N | 0.457910346 | None | None | I |
T/V | 0.2962 | likely_benign | 0.3564 | ambiguous | -0.205 | Destabilizing | 0.851 | D | 0.495 | neutral | None | None | None | None | I |
T/W | 0.9094 | likely_pathogenic | 0.9179 | pathogenic | -0.912 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | I |
T/Y | 0.6863 | likely_pathogenic | 0.711 | pathogenic | -0.619 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.