Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29192 | 87799;87800;87801 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
N2AB | 27551 | 82876;82877;82878 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
N2A | 26624 | 80095;80096;80097 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
N2B | 20127 | 60604;60605;60606 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
Novex-1 | 20252 | 60979;60980;60981 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
Novex-2 | 20319 | 61180;61181;61182 | chr2:178557780;178557779;178557778 | chr2:179422507;179422506;179422505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.83 | N | 0.801 | 0.289 | 0.645427016598 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3701 | ambiguous | 0.3716 | ambiguous | -1.902 | Destabilizing | 0.581 | D | 0.506 | neutral | N | 0.519324164 | None | None | N |
V/C | 0.8728 | likely_pathogenic | 0.864 | pathogenic | -1.548 | Destabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | N |
V/D | 0.9713 | likely_pathogenic | 0.9722 | pathogenic | -1.858 | Destabilizing | 0.908 | D | 0.865 | deleterious | N | 0.475595066 | None | None | N |
V/E | 0.931 | likely_pathogenic | 0.9285 | pathogenic | -1.743 | Destabilizing | 0.929 | D | 0.798 | deleterious | None | None | None | None | N |
V/F | 0.6702 | likely_pathogenic | 0.6623 | pathogenic | -1.257 | Destabilizing | 0.83 | D | 0.801 | deleterious | N | 0.479584765 | None | None | N |
V/G | 0.7201 | likely_pathogenic | 0.7131 | pathogenic | -2.356 | Highly Destabilizing | 0.908 | D | 0.814 | deleterious | N | 0.520169526 | None | None | N |
V/H | 0.9709 | likely_pathogenic | 0.9682 | pathogenic | -1.93 | Destabilizing | 0.993 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.0986 | likely_benign | 0.114 | benign | -0.693 | Destabilizing | 0.004 | N | 0.369 | neutral | N | 0.487830608 | None | None | N |
V/K | 0.9517 | likely_pathogenic | 0.9484 | pathogenic | -1.551 | Destabilizing | 0.929 | D | 0.812 | deleterious | None | None | None | None | N |
V/L | 0.441 | ambiguous | 0.5166 | ambiguous | -0.693 | Destabilizing | 0.09 | N | 0.443 | neutral | N | 0.476016104 | None | None | N |
V/M | 0.3322 | likely_benign | 0.364 | ambiguous | -0.68 | Destabilizing | 0.866 | D | 0.742 | deleterious | None | None | None | None | N |
V/N | 0.8533 | likely_pathogenic | 0.8611 | pathogenic | -1.577 | Destabilizing | 0.976 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9554 | likely_pathogenic | 0.9665 | pathogenic | -1.063 | Destabilizing | 0.976 | D | 0.857 | deleterious | None | None | None | None | N |
V/Q | 0.8972 | likely_pathogenic | 0.8843 | pathogenic | -1.583 | Destabilizing | 0.976 | D | 0.861 | deleterious | None | None | None | None | N |
V/R | 0.9332 | likely_pathogenic | 0.93 | pathogenic | -1.206 | Destabilizing | 0.929 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.6215 | likely_pathogenic | 0.6004 | pathogenic | -2.252 | Highly Destabilizing | 0.929 | D | 0.779 | deleterious | None | None | None | None | N |
V/T | 0.4156 | ambiguous | 0.411 | ambiguous | -2.0 | Highly Destabilizing | 0.648 | D | 0.635 | neutral | None | None | None | None | N |
V/W | 0.9906 | likely_pathogenic | 0.9893 | pathogenic | -1.575 | Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9554 | likely_pathogenic | 0.9557 | pathogenic | -1.244 | Destabilizing | 0.929 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.