Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29195 | 87808;87809;87810 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
N2AB | 27554 | 82885;82886;82887 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
N2A | 26627 | 80104;80105;80106 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
N2B | 20130 | 60613;60614;60615 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
Novex-1 | 20255 | 60988;60989;60990 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
Novex-2 | 20322 | 61189;61190;61191 | chr2:178557771;178557770;178557769 | chr2:179422498;179422497;179422496 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs751134822 | -1.055 | None | N | 0.231 | 0.186 | 0.223847106136 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/N | rs751134822 | -1.055 | None | N | 0.231 | 0.186 | 0.223847106136 | gnomAD-4.0.0 | 2.0525E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47818E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0977 | likely_benign | 0.118 | benign | -0.668 | Destabilizing | 0.005 | N | 0.295 | neutral | N | 0.491069655 | None | None | N |
T/C | 0.2123 | likely_benign | 0.2187 | benign | -0.432 | Destabilizing | None | N | 0.292 | neutral | None | None | None | None | N |
T/D | 0.5062 | ambiguous | 0.5096 | ambiguous | -0.899 | Destabilizing | 0.016 | N | 0.46 | neutral | None | None | None | None | N |
T/E | 0.4833 | ambiguous | 0.4957 | ambiguous | -0.721 | Destabilizing | 0.038 | N | 0.465 | neutral | None | None | None | None | N |
T/F | 0.4775 | ambiguous | 0.5275 | ambiguous | -0.551 | Destabilizing | 0.356 | N | 0.592 | neutral | None | None | None | None | N |
T/G | 0.2009 | likely_benign | 0.2087 | benign | -1.044 | Destabilizing | 0.016 | N | 0.449 | neutral | None | None | None | None | N |
T/H | 0.2885 | likely_benign | 0.3026 | benign | -1.09 | Destabilizing | 0.214 | N | 0.585 | neutral | None | None | None | None | N |
T/I | 0.4322 | ambiguous | 0.4927 | ambiguous | 0.299 | Stabilizing | 0.055 | N | 0.497 | neutral | N | 0.515668371 | None | None | N |
T/K | 0.2842 | likely_benign | 0.3051 | benign | -0.26 | Destabilizing | 0.038 | N | 0.469 | neutral | None | None | None | None | N |
T/L | 0.1347 | likely_benign | 0.1789 | benign | 0.299 | Stabilizing | 0.031 | N | 0.427 | neutral | None | None | None | None | N |
T/M | 0.1255 | likely_benign | 0.159 | benign | 0.115 | Stabilizing | 0.628 | D | 0.539 | neutral | None | None | None | None | N |
T/N | 0.0847 | likely_benign | 0.0982 | benign | -0.92 | Destabilizing | None | N | 0.231 | neutral | N | 0.476826514 | None | None | N |
T/P | 0.0801 | likely_benign | 0.0843 | benign | 0.008 | Stabilizing | 0.106 | N | 0.56 | neutral | N | 0.468179234 | None | None | N |
T/Q | 0.2576 | likely_benign | 0.2674 | benign | -0.697 | Destabilizing | 0.214 | N | 0.572 | neutral | None | None | None | None | N |
T/R | 0.2391 | likely_benign | 0.2657 | benign | -0.397 | Destabilizing | 0.072 | N | 0.495 | neutral | None | None | None | None | N |
T/S | 0.1025 | likely_benign | 0.1156 | benign | -1.148 | Destabilizing | None | N | 0.236 | neutral | N | 0.492284197 | None | None | N |
T/V | 0.2688 | likely_benign | 0.3146 | benign | 0.008 | Stabilizing | 0.031 | N | 0.365 | neutral | None | None | None | None | N |
T/W | 0.7764 | likely_pathogenic | 0.7634 | pathogenic | -0.784 | Destabilizing | 0.864 | D | 0.616 | neutral | None | None | None | None | N |
T/Y | 0.3859 | ambiguous | 0.4257 | ambiguous | -0.33 | Destabilizing | 0.356 | N | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.