Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29197 | 87814;87815;87816 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
N2AB | 27556 | 82891;82892;82893 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
N2A | 26629 | 80110;80111;80112 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
N2B | 20132 | 60619;60620;60621 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
Novex-1 | 20257 | 60994;60995;60996 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
Novex-2 | 20324 | 61195;61196;61197 | chr2:178557765;178557764;178557763 | chr2:179422492;179422491;179422490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/R | None | None | 0.106 | N | 0.529 | 0.317 | 0.626322489162 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
M/T | None | None | None | N | 0.327 | 0.324 | 0.60311569301 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6039 | likely_pathogenic | 0.6222 | pathogenic | -1.825 | Destabilizing | 0.007 | N | 0.417 | neutral | None | None | None | None | N |
M/C | 0.6153 | likely_pathogenic | 0.6608 | pathogenic | -1.578 | Destabilizing | 0.628 | D | 0.535 | neutral | None | None | None | None | N |
M/D | 0.9792 | likely_pathogenic | 0.9789 | pathogenic | -0.641 | Destabilizing | 0.072 | N | 0.555 | neutral | None | None | None | None | N |
M/E | 0.8898 | likely_pathogenic | 0.8804 | pathogenic | -0.52 | Destabilizing | 0.072 | N | 0.507 | neutral | None | None | None | None | N |
M/F | 0.3252 | likely_benign | 0.3407 | ambiguous | -0.542 | Destabilizing | 0.072 | N | 0.358 | neutral | None | None | None | None | N |
M/G | 0.8143 | likely_pathogenic | 0.8263 | pathogenic | -2.214 | Highly Destabilizing | 0.072 | N | 0.54 | neutral | None | None | None | None | N |
M/H | 0.8023 | likely_pathogenic | 0.8082 | pathogenic | -1.208 | Destabilizing | 0.628 | D | 0.542 | neutral | None | None | None | None | N |
M/I | 0.2041 | likely_benign | 0.2223 | benign | -0.769 | Destabilizing | None | N | 0.122 | neutral | N | 0.366637767 | None | None | N |
M/K | 0.7047 | likely_pathogenic | 0.6646 | pathogenic | -0.797 | Destabilizing | 0.055 | N | 0.483 | neutral | N | 0.488697399 | None | None | N |
M/L | 0.1253 | likely_benign | 0.1275 | benign | -0.769 | Destabilizing | 0.001 | N | 0.202 | neutral | N | 0.358786288 | None | None | N |
M/N | 0.8157 | likely_pathogenic | 0.8018 | pathogenic | -0.92 | Destabilizing | 0.072 | N | 0.54 | neutral | None | None | None | None | N |
M/P | 0.9773 | likely_pathogenic | 0.9778 | pathogenic | -1.096 | Destabilizing | 0.136 | N | 0.563 | neutral | None | None | None | None | N |
M/Q | 0.6312 | likely_pathogenic | 0.5823 | pathogenic | -0.816 | Destabilizing | 0.356 | N | 0.441 | neutral | None | None | None | None | N |
M/R | 0.6913 | likely_pathogenic | 0.6722 | pathogenic | -0.48 | Destabilizing | 0.106 | N | 0.529 | neutral | N | 0.477749687 | None | None | N |
M/S | 0.7135 | likely_pathogenic | 0.72 | pathogenic | -1.577 | Destabilizing | 0.016 | N | 0.436 | neutral | None | None | None | None | N |
M/T | 0.4905 | ambiguous | 0.4796 | ambiguous | -1.325 | Destabilizing | None | N | 0.327 | neutral | N | 0.423280484 | None | None | N |
M/V | 0.1104 | likely_benign | 0.1146 | benign | -1.096 | Destabilizing | 0.001 | N | 0.279 | neutral | N | 0.373328879 | None | None | N |
M/W | 0.7786 | likely_pathogenic | 0.7939 | pathogenic | -0.568 | Destabilizing | 0.864 | D | 0.534 | neutral | None | None | None | None | N |
M/Y | 0.6686 | likely_pathogenic | 0.6981 | pathogenic | -0.586 | Destabilizing | 0.356 | N | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.