Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29199 | 87820;87821;87822 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
N2AB | 27558 | 82897;82898;82899 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
N2A | 26631 | 80116;80117;80118 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
N2B | 20134 | 60625;60626;60627 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
Novex-1 | 20259 | 61000;61001;61002 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
Novex-2 | 20326 | 61201;61202;61203 | chr2:178557759;178557758;178557757 | chr2:179422486;179422485;179422484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.031 | N | 0.409 | 0.054 | 0.496693547531 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5128 | ambiguous | 0.568 | pathogenic | -2.116 | Highly Destabilizing | 0.296 | N | 0.658 | neutral | N | 0.50296035 | None | None | N |
V/C | 0.8476 | likely_pathogenic | 0.8588 | pathogenic | -1.663 | Destabilizing | 0.991 | D | 0.802 | deleterious | None | None | None | None | N |
V/D | 0.9778 | likely_pathogenic | 0.983 | pathogenic | -2.571 | Highly Destabilizing | 0.879 | D | 0.891 | deleterious | N | 0.498736793 | None | None | N |
V/E | 0.95 | likely_pathogenic | 0.9549 | pathogenic | -2.352 | Highly Destabilizing | 0.967 | D | 0.872 | deleterious | None | None | None | None | N |
V/F | 0.4323 | ambiguous | 0.4735 | ambiguous | -1.297 | Destabilizing | 0.782 | D | 0.817 | deleterious | N | 0.498163681 | None | None | N |
V/G | 0.7627 | likely_pathogenic | 0.7932 | pathogenic | -2.659 | Highly Destabilizing | 0.879 | D | 0.881 | deleterious | D | 0.542947474 | None | None | N |
V/H | 0.9763 | likely_pathogenic | 0.9795 | pathogenic | -2.329 | Highly Destabilizing | 0.991 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.0777 | likely_benign | 0.0794 | benign | -0.602 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.470941145 | None | None | N |
V/K | 0.9695 | likely_pathogenic | 0.9721 | pathogenic | -1.87 | Destabilizing | 0.906 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.3332 | likely_benign | 0.3443 | ambiguous | -0.602 | Destabilizing | 0.031 | N | 0.409 | neutral | N | 0.510302036 | None | None | N |
V/M | 0.3331 | likely_benign | 0.3732 | ambiguous | -0.599 | Destabilizing | 0.826 | D | 0.686 | prob.neutral | None | None | None | None | N |
V/N | 0.9246 | likely_pathogenic | 0.9414 | pathogenic | -2.147 | Highly Destabilizing | 0.967 | D | 0.892 | deleterious | None | None | None | None | N |
V/P | 0.9455 | likely_pathogenic | 0.9584 | pathogenic | -1.079 | Destabilizing | 0.967 | D | 0.867 | deleterious | None | None | None | None | N |
V/Q | 0.9462 | likely_pathogenic | 0.9538 | pathogenic | -1.992 | Destabilizing | 0.967 | D | 0.885 | deleterious | None | None | None | None | N |
V/R | 0.9567 | likely_pathogenic | 0.9609 | pathogenic | -1.702 | Destabilizing | 0.906 | D | 0.897 | deleterious | None | None | None | None | N |
V/S | 0.824 | likely_pathogenic | 0.8616 | pathogenic | -2.782 | Highly Destabilizing | 0.906 | D | 0.845 | deleterious | None | None | None | None | N |
V/T | 0.7291 | likely_pathogenic | 0.7587 | pathogenic | -2.404 | Highly Destabilizing | 0.575 | D | 0.663 | neutral | None | None | None | None | N |
V/W | 0.9726 | likely_pathogenic | 0.9744 | pathogenic | -1.749 | Destabilizing | 0.991 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.8925 | likely_pathogenic | 0.9091 | pathogenic | -1.374 | Destabilizing | 0.906 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.