Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29204 | 87835;87836;87837 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
N2AB | 27563 | 82912;82913;82914 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
N2A | 26636 | 80131;80132;80133 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
N2B | 20139 | 60640;60641;60642 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
Novex-1 | 20264 | 61015;61016;61017 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
Novex-2 | 20331 | 61216;61217;61218 | chr2:178557744;178557743;178557742 | chr2:179422471;179422470;179422469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.477 | N | 0.427 | 0.188 | 0.21737058555 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs72648228 | -0.316 | 0.928 | N | 0.45 | 0.274 | 0.309530620856 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs72648228 | -0.316 | 0.928 | N | 0.45 | 0.274 | 0.309530620856 | gnomAD-4.0.0 | 6.84163E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51889E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/K | None | None | 0.006 | N | 0.267 | 0.146 | 0.213573922156 | gnomAD-4.0.0 | 6.84163E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99421E-07 | 0 | 0 |
T/P | rs765145227 | -0.444 | 0.928 | N | 0.449 | 0.298 | 0.20549828249 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
T/P | rs765145227 | -0.444 | 0.928 | N | 0.449 | 0.298 | 0.20549828249 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs765145227 | -0.444 | 0.928 | N | 0.449 | 0.298 | 0.20549828249 | gnomAD-4.0.0 | 6.56883E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
T/R | rs72648228 | -0.301 | 0.761 | N | 0.427 | 0.104 | None | gnomAD-2.1.1 | 1.96155E-04 | None | None | None | None | N | None | 2.23141E-03 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/R | rs72648228 | -0.301 | 0.761 | N | 0.427 | 0.104 | None | gnomAD-3.1.2 | 5.12517E-04 | None | None | None | None | N | None | 1.7852E-03 | 1.96309E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
T/R | rs72648228 | -0.301 | 0.761 | N | 0.427 | 0.104 | None | 1000 genomes | 1.39776E-03 | None | None | None | None | N | None | 5.3E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
T/R | rs72648228 | -0.301 | 0.761 | N | 0.427 | 0.104 | None | gnomAD-4.0.0 | 1.05951E-04 | None | None | None | None | N | None | 2.0785E-03 | 9.99633E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.44041E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0636 | likely_benign | 0.0675 | benign | -0.554 | Destabilizing | 0.477 | N | 0.427 | neutral | N | 0.463297523 | None | None | N |
T/C | 0.2958 | likely_benign | 0.3281 | benign | -0.372 | Destabilizing | 0.995 | D | 0.477 | neutral | None | None | None | None | N |
T/D | 0.4568 | ambiguous | 0.5079 | ambiguous | -0.131 | Destabilizing | 0.894 | D | 0.431 | neutral | None | None | None | None | N |
T/E | 0.2815 | likely_benign | 0.2759 | benign | -0.186 | Destabilizing | 0.547 | D | 0.461 | neutral | None | None | None | None | N |
T/F | 0.2785 | likely_benign | 0.3357 | benign | -0.817 | Destabilizing | 0.981 | D | 0.571 | neutral | None | None | None | None | N |
T/G | 0.2171 | likely_benign | 0.2517 | benign | -0.74 | Destabilizing | 0.707 | D | 0.49 | neutral | None | None | None | None | N |
T/H | 0.2225 | likely_benign | 0.2665 | benign | -1.02 | Destabilizing | 0.985 | D | 0.562 | neutral | None | None | None | None | N |
T/I | 0.147 | likely_benign | 0.1776 | benign | -0.171 | Destabilizing | 0.928 | D | 0.45 | neutral | N | 0.516172002 | None | None | N |
T/K | 0.1148 | likely_benign | 0.1098 | benign | -0.612 | Destabilizing | 0.006 | N | 0.267 | neutral | N | 0.479576484 | None | None | N |
T/L | 0.0837 | likely_benign | 0.0969 | benign | -0.171 | Destabilizing | 0.707 | D | 0.467 | neutral | None | None | None | None | N |
T/M | 0.082 | likely_benign | 0.0929 | benign | 0.097 | Stabilizing | 0.995 | D | 0.455 | neutral | None | None | None | None | N |
T/N | 0.1366 | likely_benign | 0.1659 | benign | -0.41 | Destabilizing | 0.894 | D | 0.507 | neutral | None | None | None | None | N |
T/P | 0.0817 | likely_benign | 0.095 | benign | -0.268 | Destabilizing | 0.928 | D | 0.449 | neutral | N | 0.388017825 | None | None | N |
T/Q | 0.1647 | likely_benign | 0.1687 | benign | -0.679 | Destabilizing | 0.809 | D | 0.45 | neutral | None | None | None | None | N |
T/R | 0.1052 | likely_benign | 0.093 | benign | -0.269 | Destabilizing | 0.761 | D | 0.427 | neutral | N | 0.494545936 | None | None | N |
T/S | 0.1119 | likely_benign | 0.1309 | benign | -0.646 | Destabilizing | 0.477 | N | 0.454 | neutral | N | 0.476517536 | None | None | N |
T/V | 0.1051 | likely_benign | 0.1208 | benign | -0.268 | Destabilizing | 0.707 | D | 0.499 | neutral | None | None | None | None | N |
T/W | 0.6016 | likely_pathogenic | 0.6265 | pathogenic | -0.753 | Destabilizing | 0.995 | D | 0.611 | neutral | None | None | None | None | N |
T/Y | 0.3077 | likely_benign | 0.3418 | ambiguous | -0.521 | Destabilizing | 0.981 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.