Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29206 | 87841;87842;87843 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
N2AB | 27565 | 82918;82919;82920 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
N2A | 26638 | 80137;80138;80139 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
N2B | 20141 | 60646;60647;60648 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
Novex-1 | 20266 | 61021;61022;61023 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
Novex-2 | 20333 | 61222;61223;61224 | chr2:178557738;178557737;178557736 | chr2:179422465;179422464;179422463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.285 | N | 0.369 | 0.173 | 0.223847106136 | gnomAD-4.0.0 | 6.84166E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65645E-05 |
E/G | rs1702073480 | None | 0.491 | N | 0.391 | 0.218 | 0.270001397563 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1702073480 | None | 0.491 | N | 0.391 | 0.218 | 0.270001397563 | gnomAD-4.0.0 | 1.23925E-06 | None | None | None | None | I | None | 0 | 0 | None | 3.37815E-05 | 0 | None | 0 | 0 | 8.47554E-07 | 0 | 0 |
E/K | rs1364550008 | None | 0.491 | N | 0.29 | 0.223 | 0.219573609325 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1758 | likely_benign | 0.1817 | benign | -0.896 | Destabilizing | 0.285 | N | 0.369 | neutral | N | 0.398152753 | None | None | I |
E/C | 0.7413 | likely_pathogenic | 0.7408 | pathogenic | -0.402 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | I |
E/D | 0.2145 | likely_benign | 0.2296 | benign | -1.033 | Destabilizing | 0.003 | N | 0.109 | neutral | N | 0.481867428 | None | None | I |
E/F | 0.7391 | likely_pathogenic | 0.726 | pathogenic | -0.405 | Destabilizing | 0.004 | N | 0.278 | neutral | None | None | None | None | I |
E/G | 0.2543 | likely_benign | 0.2458 | benign | -1.245 | Destabilizing | 0.491 | N | 0.391 | neutral | N | 0.420261608 | None | None | I |
E/H | 0.4879 | ambiguous | 0.5062 | ambiguous | -0.625 | Destabilizing | 0.965 | D | 0.369 | neutral | None | None | None | None | I |
E/I | 0.3067 | likely_benign | 0.3332 | benign | 0.049 | Stabilizing | 0.39 | N | 0.386 | neutral | None | None | None | None | I |
E/K | 0.1389 | likely_benign | 0.1635 | benign | -0.484 | Destabilizing | 0.491 | N | 0.29 | neutral | N | 0.406849594 | None | None | I |
E/L | 0.3864 | ambiguous | 0.3844 | ambiguous | 0.049 | Stabilizing | 0.002 | N | 0.182 | neutral | None | None | None | None | I |
E/M | 0.3674 | ambiguous | 0.3779 | ambiguous | 0.502 | Stabilizing | 0.818 | D | 0.418 | neutral | None | None | None | None | I |
E/N | 0.2896 | likely_benign | 0.3128 | benign | -0.955 | Destabilizing | 0.39 | N | 0.397 | neutral | None | None | None | None | I |
E/P | 0.9635 | likely_pathogenic | 0.9651 | pathogenic | -0.245 | Destabilizing | 0.901 | D | 0.445 | neutral | None | None | None | None | I |
E/Q | 0.131 | likely_benign | 0.1358 | benign | -0.838 | Destabilizing | 0.662 | D | 0.409 | neutral | N | 0.42595543 | None | None | I |
E/R | 0.2617 | likely_benign | 0.2661 | benign | -0.211 | Destabilizing | 0.901 | D | 0.394 | neutral | None | None | None | None | I |
E/S | 0.2261 | likely_benign | 0.2411 | benign | -1.247 | Destabilizing | 0.561 | D | 0.249 | neutral | None | None | None | None | I |
E/T | 0.2182 | likely_benign | 0.2364 | benign | -0.957 | Destabilizing | 0.561 | D | 0.365 | neutral | None | None | None | None | I |
E/V | 0.1822 | likely_benign | 0.1944 | benign | -0.245 | Destabilizing | 0.013 | N | 0.269 | neutral | N | 0.393728368 | None | None | I |
E/W | 0.9151 | likely_pathogenic | 0.9032 | pathogenic | -0.138 | Destabilizing | 0.991 | D | 0.437 | neutral | None | None | None | None | I |
E/Y | 0.6463 | likely_pathogenic | 0.6372 | pathogenic | -0.144 | Destabilizing | 0.692 | D | 0.453 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.