Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29212 | 87859;87860;87861 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
N2AB | 27571 | 82936;82937;82938 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
N2A | 26644 | 80155;80156;80157 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
N2B | 20147 | 60664;60665;60666 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
Novex-1 | 20272 | 61039;61040;61041 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
Novex-2 | 20339 | 61240;61241;61242 | chr2:178557720;178557719;178557718 | chr2:179422447;179422446;179422445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.995 | N | 0.65 | 0.535 | 0.579560680208 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
I/V | None | None | 0.878 | N | 0.271 | 0.192 | 0.277730125212 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9475 | likely_pathogenic | 0.9637 | pathogenic | -3.27 | Highly Destabilizing | 0.919 | D | 0.635 | neutral | None | None | None | None | N |
I/C | 0.9347 | likely_pathogenic | 0.95 | pathogenic | -2.565 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
I/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -4.01 | Highly Destabilizing | 0.034 | N | 0.737 | prob.delet. | None | None | None | None | N |
I/E | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.717 | Highly Destabilizing | 0.851 | D | 0.835 | deleterious | None | None | None | None | N |
I/F | 0.7619 | likely_pathogenic | 0.7955 | pathogenic | -1.996 | Destabilizing | 0.995 | D | 0.583 | neutral | N | 0.509964513 | None | None | N |
I/G | 0.9917 | likely_pathogenic | 0.9934 | pathogenic | -3.815 | Highly Destabilizing | 0.976 | D | 0.835 | deleterious | None | None | None | None | N |
I/H | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.352 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
I/K | 0.9955 | likely_pathogenic | 0.9957 | pathogenic | -2.808 | Highly Destabilizing | 0.976 | D | 0.855 | deleterious | None | None | None | None | N |
I/L | 0.3286 | likely_benign | 0.3652 | ambiguous | -1.608 | Destabilizing | 0.878 | D | 0.347 | neutral | N | 0.470358508 | None | None | N |
I/M | 0.4139 | ambiguous | 0.4699 | ambiguous | -1.747 | Destabilizing | 0.995 | D | 0.65 | neutral | N | 0.510218003 | None | None | N |
I/N | 0.9908 | likely_pathogenic | 0.9914 | pathogenic | -3.458 | Highly Destabilizing | 0.938 | D | 0.863 | deleterious | D | 0.528829237 | None | None | N |
I/P | 0.9968 | likely_pathogenic | 0.9971 | pathogenic | -2.157 | Highly Destabilizing | 0.988 | D | 0.881 | deleterious | None | None | None | None | N |
I/Q | 0.9955 | likely_pathogenic | 0.9958 | pathogenic | -3.173 | Highly Destabilizing | 0.988 | D | 0.891 | deleterious | None | None | None | None | N |
I/R | 0.9928 | likely_pathogenic | 0.993 | pathogenic | -2.593 | Highly Destabilizing | 0.988 | D | 0.893 | deleterious | None | None | None | None | N |
I/S | 0.9832 | likely_pathogenic | 0.9861 | pathogenic | -3.976 | Highly Destabilizing | 0.896 | D | 0.799 | deleterious | N | 0.517472932 | None | None | N |
I/T | 0.9715 | likely_pathogenic | 0.9754 | pathogenic | -3.548 | Highly Destabilizing | 0.946 | D | 0.71 | prob.delet. | N | 0.510471492 | None | None | N |
I/V | 0.1063 | likely_benign | 0.1111 | benign | -2.157 | Highly Destabilizing | 0.878 | D | 0.271 | neutral | N | 0.380144916 | None | None | N |
I/W | 0.9959 | likely_pathogenic | 0.996 | pathogenic | -2.421 | Highly Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
I/Y | 0.982 | likely_pathogenic | 0.9829 | pathogenic | -2.31 | Highly Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.