Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29218 | 87877;87878;87879 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
N2AB | 27577 | 82954;82955;82956 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
N2A | 26650 | 80173;80174;80175 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
N2B | 20153 | 60682;60683;60684 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
Novex-1 | 20278 | 61057;61058;61059 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
Novex-2 | 20345 | 61258;61259;61260 | chr2:178557702;178557701;178557700 | chr2:179422429;179422428;179422427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.896 | N | 0.446 | 0.321 | 0.204665344411 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9667 | likely_pathogenic | 0.9838 | pathogenic | -0.928 | Destabilizing | 0.919 | D | 0.651 | neutral | None | None | None | None | I |
F/C | 0.8633 | likely_pathogenic | 0.9311 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.474901383 | None | None | I |
F/D | 0.989 | likely_pathogenic | 0.994 | pathogenic | 0.908 | Stabilizing | 0.988 | D | 0.673 | neutral | None | None | None | None | I |
F/E | 0.9926 | likely_pathogenic | 0.9958 | pathogenic | 0.886 | Stabilizing | 0.976 | D | 0.633 | neutral | None | None | None | None | I |
F/G | 0.9839 | likely_pathogenic | 0.9899 | pathogenic | -1.118 | Destabilizing | 0.988 | D | 0.616 | neutral | None | None | None | None | I |
F/H | 0.8759 | likely_pathogenic | 0.9228 | pathogenic | 0.258 | Stabilizing | 0.076 | N | 0.403 | neutral | None | None | None | None | I |
F/I | 0.9229 | likely_pathogenic | 0.9361 | pathogenic | -0.454 | Destabilizing | 0.984 | D | 0.471 | neutral | N | 0.447560066 | None | None | I |
F/K | 0.9908 | likely_pathogenic | 0.9937 | pathogenic | -0.022 | Destabilizing | 0.976 | D | 0.665 | neutral | None | None | None | None | I |
F/L | 0.9897 | likely_pathogenic | 0.9935 | pathogenic | -0.454 | Destabilizing | 0.896 | D | 0.446 | neutral | N | 0.454179394 | None | None | I |
F/M | 0.9437 | likely_pathogenic | 0.9575 | pathogenic | -0.36 | Destabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | I |
F/N | 0.9502 | likely_pathogenic | 0.9683 | pathogenic | 0.033 | Stabilizing | 0.976 | D | 0.672 | neutral | None | None | None | None | I |
F/P | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -0.592 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | I |
F/Q | 0.9783 | likely_pathogenic | 0.9872 | pathogenic | -0.027 | Destabilizing | 0.976 | D | 0.669 | neutral | None | None | None | None | I |
F/R | 0.9737 | likely_pathogenic | 0.9827 | pathogenic | 0.436 | Stabilizing | 0.976 | D | 0.67 | neutral | None | None | None | None | I |
F/S | 0.9378 | likely_pathogenic | 0.9708 | pathogenic | -0.687 | Destabilizing | 0.968 | D | 0.613 | neutral | N | 0.484904946 | None | None | I |
F/T | 0.9756 | likely_pathogenic | 0.9841 | pathogenic | -0.617 | Destabilizing | 0.988 | D | 0.619 | neutral | None | None | None | None | I |
F/V | 0.9052 | likely_pathogenic | 0.9356 | pathogenic | -0.592 | Destabilizing | 0.896 | D | 0.592 | neutral | N | 0.447597351 | None | None | I |
F/W | 0.69 | likely_pathogenic | 0.7332 | pathogenic | -0.241 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
F/Y | 0.1927 | likely_benign | 0.2339 | benign | -0.213 | Destabilizing | 0.046 | N | 0.232 | neutral | N | 0.378124197 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.