Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29220 | 87883;87884;87885 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
N2AB | 27579 | 82960;82961;82962 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
N2A | 26652 | 80179;80180;80181 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
N2B | 20155 | 60688;60689;60690 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
Novex-1 | 20280 | 61063;61064;61065 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
Novex-2 | 20347 | 61264;61265;61266 | chr2:178557696;178557695;178557694 | chr2:179422423;179422422;179422421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1553554246 | None | 0.043 | N | 0.365 | 0.119 | 0.441844919209 | gnomAD-4.0.0 | 1.36833E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99423E-07 | 0 | 1.65645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5204 | ambiguous | 0.5868 | pathogenic | -1.376 | Destabilizing | 0.25 | N | 0.593 | neutral | None | None | None | None | N |
I/C | 0.6734 | likely_pathogenic | 0.7273 | pathogenic | -0.961 | Destabilizing | 0.947 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/D | 0.8549 | likely_pathogenic | 0.9086 | pathogenic | -0.401 | Destabilizing | 0.7 | D | 0.767 | deleterious | None | None | None | None | N |
I/E | 0.7162 | likely_pathogenic | 0.8019 | pathogenic | -0.433 | Destabilizing | 0.7 | D | 0.766 | deleterious | None | None | None | None | N |
I/F | 0.2075 | likely_benign | 0.2648 | benign | -1.013 | Destabilizing | 0.781 | D | 0.683 | prob.neutral | N | 0.482093927 | None | None | N |
I/G | 0.8158 | likely_pathogenic | 0.8623 | pathogenic | -1.643 | Destabilizing | 0.7 | D | 0.753 | deleterious | None | None | None | None | N |
I/H | 0.646 | likely_pathogenic | 0.7271 | pathogenic | -0.681 | Destabilizing | 0.982 | D | 0.777 | deleterious | None | None | None | None | N |
I/K | 0.527 | ambiguous | 0.6053 | pathogenic | -0.719 | Destabilizing | 0.7 | D | 0.768 | deleterious | None | None | None | None | N |
I/L | 0.1488 | likely_benign | 0.1578 | benign | -0.746 | Destabilizing | 0.094 | N | 0.395 | neutral | N | 0.44980815 | None | None | N |
I/M | 0.144 | likely_benign | 0.1627 | benign | -0.647 | Destabilizing | 0.781 | D | 0.648 | neutral | N | 0.474629237 | None | None | N |
I/N | 0.4294 | ambiguous | 0.5215 | ambiguous | -0.508 | Destabilizing | 0.638 | D | 0.782 | deleterious | N | 0.490886769 | None | None | N |
I/P | 0.8722 | likely_pathogenic | 0.8814 | pathogenic | -0.923 | Destabilizing | 0.826 | D | 0.789 | deleterious | None | None | None | None | N |
I/Q | 0.57 | likely_pathogenic | 0.6581 | pathogenic | -0.731 | Destabilizing | 0.826 | D | 0.779 | deleterious | None | None | None | None | N |
I/R | 0.4721 | ambiguous | 0.553 | ambiguous | -0.102 | Destabilizing | 0.7 | D | 0.785 | deleterious | None | None | None | None | N |
I/S | 0.459 | ambiguous | 0.5283 | ambiguous | -1.176 | Destabilizing | 0.201 | N | 0.652 | neutral | N | 0.481131135 | None | None | N |
I/T | 0.3372 | likely_benign | 0.402 | ambiguous | -1.09 | Destabilizing | 0.002 | N | 0.339 | neutral | N | 0.458504991 | None | None | N |
I/V | 0.0767 | likely_benign | 0.0836 | benign | -0.923 | Destabilizing | 0.043 | N | 0.365 | neutral | N | 0.415503576 | None | None | N |
I/W | 0.864 | likely_pathogenic | 0.895 | pathogenic | -0.958 | Destabilizing | 0.982 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.6048 | likely_pathogenic | 0.6778 | pathogenic | -0.751 | Destabilizing | 0.826 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.