Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29221 | 87886;87887;87888 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
N2AB | 27580 | 82963;82964;82965 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
N2A | 26653 | 80182;80183;80184 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
N2B | 20156 | 60691;60692;60693 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
Novex-1 | 20281 | 61066;61067;61068 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
Novex-2 | 20348 | 61267;61268;61269 | chr2:178557693;178557692;178557691 | chr2:179422420;179422419;179422418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.999 | N | 0.617 | 0.445 | 0.178374595973 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85778E-06 | 0 | 0 |
S/N | None | None | 0.999 | D | 0.639 | 0.507 | 0.364730456448 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.5442 | ambiguous | 0.5521 | ambiguous | -0.834 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
S/C | 0.8012 | likely_pathogenic | 0.8243 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.545942306 | None | None | N |
S/D | 0.9943 | likely_pathogenic | 0.9956 | pathogenic | -1.348 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
S/E | 0.9982 | likely_pathogenic | 0.9985 | pathogenic | -1.251 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
S/F | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
S/G | 0.1672 | likely_benign | 0.2017 | benign | -1.161 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.46566025 | None | None | N |
S/H | 0.9939 | likely_pathogenic | 0.9942 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
S/I | 0.9973 | likely_pathogenic | 0.9979 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.534332511 | None | None | N |
S/K | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.898 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
S/L | 0.9789 | likely_pathogenic | 0.9816 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/M | 0.9896 | likely_pathogenic | 0.9908 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
S/N | 0.9789 | likely_pathogenic | 0.9819 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.544674858 | None | None | N |
S/P | 0.9958 | likely_pathogenic | 0.9962 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/Q | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
S/R | 0.9986 | likely_pathogenic | 0.9987 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.769 | deleterious | D | 0.545181837 | None | None | N |
S/T | 0.8261 | likely_pathogenic | 0.8458 | pathogenic | -1.01 | Destabilizing | 0.999 | D | 0.59 | neutral | D | 0.532558084 | None | None | N |
S/V | 0.9952 | likely_pathogenic | 0.9959 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/W | 0.9963 | likely_pathogenic | 0.9966 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
S/Y | 0.9947 | likely_pathogenic | 0.9953 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.