Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29225 | 87898;87899;87900 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
N2AB | 27584 | 82975;82976;82977 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
N2A | 26657 | 80194;80195;80196 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
N2B | 20160 | 60703;60704;60705 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
Novex-1 | 20285 | 61078;61079;61080 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
Novex-2 | 20352 | 61279;61280;61281 | chr2:178557681;178557680;178557679 | chr2:179422408;179422407;179422406 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | N | 0.786 | 0.468 | 0.733514829897 | gnomAD-4.0.0 | 2.05251E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69827E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5206 | ambiguous | 0.6251 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.729 | deleterious | N | 0.50605937 | None | None | I |
D/C | 0.873 | likely_pathogenic | 0.9216 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
D/E | 0.3907 | ambiguous | 0.4515 | ambiguous | -0.784 | Destabilizing | 0.999 | D | 0.542 | neutral | N | 0.42734787 | None | None | I |
D/F | 0.8785 | likely_pathogenic | 0.9196 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
D/G | 0.6607 | likely_pathogenic | 0.7471 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.483154207 | None | None | I |
D/H | 0.7214 | likely_pathogenic | 0.7936 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.477927194 | None | None | I |
D/I | 0.5924 | likely_pathogenic | 0.7049 | pathogenic | 0.588 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
D/K | 0.8669 | likely_pathogenic | 0.9078 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
D/L | 0.69 | likely_pathogenic | 0.7706 | pathogenic | 0.588 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
D/M | 0.868 | likely_pathogenic | 0.9192 | pathogenic | 1.094 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
D/N | 0.2298 | likely_benign | 0.3071 | benign | -1.209 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.518719236 | None | None | I |
D/P | 0.8999 | likely_pathogenic | 0.9418 | pathogenic | 0.245 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
D/Q | 0.7795 | likely_pathogenic | 0.8481 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | I |
D/R | 0.8772 | likely_pathogenic | 0.9168 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
D/S | 0.319 | likely_benign | 0.4193 | ambiguous | -1.546 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
D/T | 0.4563 | ambiguous | 0.5726 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/V | 0.4055 | ambiguous | 0.5178 | ambiguous | 0.245 | Stabilizing | 1.0 | D | 0.769 | deleterious | N | 0.485454811 | None | None | I |
D/W | 0.9813 | likely_pathogenic | 0.9881 | pathogenic | 0.125 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
D/Y | 0.6014 | likely_pathogenic | 0.6846 | pathogenic | 0.226 | Stabilizing | 1.0 | D | 0.786 | deleterious | N | 0.496284939 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.