Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29231 | 87916;87917;87918 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
N2AB | 27590 | 82993;82994;82995 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
N2A | 26663 | 80212;80213;80214 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
N2B | 20166 | 60721;60722;60723 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
Novex-1 | 20291 | 61096;61097;61098 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
Novex-2 | 20358 | 61297;61298;61299 | chr2:178557663;178557662;178557661 | chr2:179422390;179422389;179422388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.429 | N | 0.567 | 0.1 | 0.49741755877 | gnomAD-4.0.0 | 3.18283E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 2.85801E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4059 | ambiguous | 0.3738 | ambiguous | -2.194 | Highly Destabilizing | 0.914 | D | 0.597 | neutral | N | 0.366154978 | None | None | I |
V/C | 0.8772 | likely_pathogenic | 0.8724 | pathogenic | -2.219 | Highly Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | I |
V/D | 0.9896 | likely_pathogenic | 0.9867 | pathogenic | -2.996 | Highly Destabilizing | 0.996 | D | 0.833 | deleterious | N | 0.491866123 | None | None | I |
V/E | 0.9751 | likely_pathogenic | 0.9683 | pathogenic | -2.824 | Highly Destabilizing | 0.997 | D | 0.824 | deleterious | None | None | None | None | I |
V/F | 0.7553 | likely_pathogenic | 0.7564 | pathogenic | -1.317 | Destabilizing | 0.974 | D | 0.71 | prob.delet. | N | 0.469959525 | None | None | I |
V/G | 0.7593 | likely_pathogenic | 0.7404 | pathogenic | -2.661 | Highly Destabilizing | 0.987 | D | 0.789 | deleterious | N | 0.468228459 | None | None | I |
V/H | 0.9911 | likely_pathogenic | 0.9895 | pathogenic | -2.182 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | I |
V/I | 0.1016 | likely_benign | 0.1135 | benign | -0.904 | Destabilizing | 0.032 | N | 0.28 | neutral | N | 0.456006191 | None | None | I |
V/K | 0.979 | likely_pathogenic | 0.9732 | pathogenic | -1.804 | Destabilizing | 0.99 | D | 0.821 | deleterious | None | None | None | None | I |
V/L | 0.4396 | ambiguous | 0.4672 | ambiguous | -0.904 | Destabilizing | 0.429 | N | 0.567 | neutral | N | 0.501143835 | None | None | I |
V/M | 0.4606 | ambiguous | 0.4401 | ambiguous | -1.252 | Destabilizing | 0.98 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/N | 0.94 | likely_pathogenic | 0.9265 | pathogenic | -2.106 | Highly Destabilizing | 0.997 | D | 0.863 | deleterious | None | None | None | None | I |
V/P | 0.8201 | likely_pathogenic | 0.8601 | pathogenic | -1.308 | Destabilizing | 0.997 | D | 0.861 | deleterious | None | None | None | None | I |
V/Q | 0.9667 | likely_pathogenic | 0.9571 | pathogenic | -2.055 | Highly Destabilizing | 0.997 | D | 0.872 | deleterious | None | None | None | None | I |
V/R | 0.9594 | likely_pathogenic | 0.9511 | pathogenic | -1.519 | Destabilizing | 0.997 | D | 0.855 | deleterious | None | None | None | None | I |
V/S | 0.7953 | likely_pathogenic | 0.7412 | pathogenic | -2.691 | Highly Destabilizing | 0.99 | D | 0.811 | deleterious | None | None | None | None | I |
V/T | 0.687 | likely_pathogenic | 0.6206 | pathogenic | -2.388 | Highly Destabilizing | 0.933 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/W | 0.9949 | likely_pathogenic | 0.9944 | pathogenic | -1.705 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
V/Y | 0.9788 | likely_pathogenic | 0.9778 | pathogenic | -1.405 | Destabilizing | 0.99 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.