Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29233 | 87922;87923;87924 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
N2AB | 27592 | 82999;83000;83001 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
N2A | 26665 | 80218;80219;80220 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
N2B | 20168 | 60727;60728;60729 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
Novex-1 | 20293 | 61102;61103;61104 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
Novex-2 | 20360 | 61303;61304;61305 | chr2:178557657;178557656;178557655 | chr2:179422384;179422383;179422382 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1702051933 | None | 0.997 | N | 0.561 | 0.163 | 0.546952355657 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5834 | likely_pathogenic | 0.583 | pathogenic | -0.41 | Destabilizing | 0.998 | D | 0.728 | deleterious | None | None | None | None | I |
L/C | 0.7039 | likely_pathogenic | 0.7321 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | I |
L/D | 0.8697 | likely_pathogenic | 0.8978 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.688 | prob.delet. | None | None | None | None | I |
L/E | 0.7045 | likely_pathogenic | 0.7202 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.697 | prob.delet. | None | None | None | None | I |
L/F | 0.1937 | likely_benign | 0.1961 | benign | -0.542 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | I |
L/G | 0.7778 | likely_pathogenic | 0.7904 | pathogenic | -0.527 | Destabilizing | 0.999 | D | 0.685 | prob.delet. | None | None | None | None | I |
L/H | 0.311 | likely_benign | 0.3218 | benign | 0.12 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
L/I | 0.2656 | likely_benign | 0.2772 | benign | -0.224 | Destabilizing | 0.997 | D | 0.524 | neutral | N | 0.447693352 | None | None | I |
L/K | 0.4334 | ambiguous | 0.4437 | ambiguous | -0.324 | Destabilizing | 0.999 | D | 0.695 | prob.delet. | None | None | None | None | I |
L/M | 0.1755 | likely_benign | 0.1902 | benign | -0.525 | Destabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | I |
L/N | 0.5499 | ambiguous | 0.6061 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.695 | prob.delet. | None | None | None | None | I |
L/P | 0.4487 | ambiguous | 0.477 | ambiguous | -0.257 | Destabilizing | 1.0 | D | 0.697 | prob.delet. | N | 0.453965963 | None | None | I |
L/Q | 0.3122 | likely_benign | 0.3231 | benign | -0.359 | Destabilizing | 1.0 | D | 0.684 | prob.delet. | N | 0.448213427 | None | None | I |
L/R | 0.3493 | ambiguous | 0.3561 | ambiguous | 0.16 | Stabilizing | 0.999 | D | 0.694 | prob.delet. | N | 0.453792605 | None | None | I |
L/S | 0.5744 | likely_pathogenic | 0.6007 | pathogenic | -0.527 | Destabilizing | 0.999 | D | 0.704 | prob.delet. | None | None | None | None | I |
L/T | 0.5855 | likely_pathogenic | 0.6226 | pathogenic | -0.518 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
L/V | 0.2719 | likely_benign | 0.2896 | benign | -0.257 | Destabilizing | 0.997 | D | 0.561 | neutral | N | 0.490540052 | None | None | I |
L/W | 0.2967 | likely_benign | 0.3002 | benign | -0.575 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | I |
L/Y | 0.3088 | likely_benign | 0.3041 | benign | -0.327 | Destabilizing | 0.999 | D | 0.724 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.