Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29240 | 87943;87944;87945 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
N2AB | 27599 | 83020;83021;83022 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
N2A | 26672 | 80239;80240;80241 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
N2B | 20175 | 60748;60749;60750 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
Novex-1 | 20300 | 61123;61124;61125 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
Novex-2 | 20367 | 61324;61325;61326 | chr2:178557544;178557543;178557542 | chr2:179422271;179422270;179422269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.956 | N | 0.706 | 0.349 | 0.316198179892 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
P/T | None | None | 0.978 | N | 0.736 | 0.384 | 0.502878934189 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1316 | likely_benign | 0.1267 | benign | -1.36 | Destabilizing | 0.198 | N | 0.377 | neutral | N | 0.475013239 | None | None | I |
P/C | 0.7002 | likely_pathogenic | 0.7283 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/D | 0.9463 | likely_pathogenic | 0.9455 | pathogenic | -1.311 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | I |
P/E | 0.7395 | likely_pathogenic | 0.7007 | pathogenic | -1.358 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/F | 0.788 | likely_pathogenic | 0.8 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | I |
P/G | 0.7395 | likely_pathogenic | 0.7448 | pathogenic | -1.605 | Destabilizing | 0.967 | D | 0.761 | deleterious | None | None | None | None | I |
P/H | 0.57 | likely_pathogenic | 0.5746 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/I | 0.5747 | likely_pathogenic | 0.5712 | pathogenic | -0.803 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
P/K | 0.7461 | likely_pathogenic | 0.7347 | pathogenic | -0.944 | Destabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | I |
P/L | 0.3348 | likely_benign | 0.3879 | ambiguous | -0.803 | Destabilizing | 0.978 | D | 0.809 | deleterious | D | 0.522331096 | None | None | I |
P/M | 0.5467 | ambiguous | 0.552 | ambiguous | -0.653 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
P/N | 0.7942 | likely_pathogenic | 0.782 | pathogenic | -0.739 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | I |
P/Q | 0.4049 | ambiguous | 0.3998 | ambiguous | -1.027 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | N | 0.486323169 | None | None | I |
P/R | 0.5936 | likely_pathogenic | 0.6011 | pathogenic | -0.408 | Destabilizing | 0.997 | D | 0.799 | deleterious | N | 0.509542759 | None | None | I |
P/S | 0.318 | likely_benign | 0.3217 | benign | -1.228 | Destabilizing | 0.956 | D | 0.706 | prob.neutral | N | 0.486069679 | None | None | I |
P/T | 0.3623 | ambiguous | 0.3492 | ambiguous | -1.174 | Destabilizing | 0.978 | D | 0.736 | prob.delet. | N | 0.498946922 | None | None | I |
P/V | 0.4502 | ambiguous | 0.4639 | ambiguous | -0.955 | Destabilizing | 0.983 | D | 0.777 | deleterious | None | None | None | None | I |
P/W | 0.929 | likely_pathogenic | 0.9414 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
P/Y | 0.8142 | likely_pathogenic | 0.819 | pathogenic | -1.089 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.