Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2924087943;87944;87945 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
N2AB2759983020;83021;83022 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
N2A2667280239;80240;80241 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
N2B2017560748;60749;60750 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
Novex-12030061123;61124;61125 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
Novex-22036761324;61325;61326 chr2:178557544;178557543;178557542chr2:179422271;179422270;179422269
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-101
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.2964
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/S None None 0.956 N 0.706 0.349 0.316198179892 gnomAD-4.0.0 1.20033E-06 None None None None I None 0 0 None 0 0 None 0 0 1.31251E-06 0 0
P/T None None 0.978 N 0.736 0.384 0.502878934189 gnomAD-4.0.0 3.60098E-06 None None None None I None 0 0 None 0 0 None 0 0 3.93752E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.1316 likely_benign 0.1267 benign -1.36 Destabilizing 0.198 N 0.377 neutral N 0.475013239 None None I
P/C 0.7002 likely_pathogenic 0.7283 pathogenic -1.111 Destabilizing 1.0 D 0.821 deleterious None None None None I
P/D 0.9463 likely_pathogenic 0.9455 pathogenic -1.311 Destabilizing 0.998 D 0.735 prob.delet. None None None None I
P/E 0.7395 likely_pathogenic 0.7007 pathogenic -1.358 Destabilizing 0.998 D 0.737 prob.delet. None None None None I
P/F 0.788 likely_pathogenic 0.8 pathogenic -1.318 Destabilizing 0.999 D 0.84 deleterious None None None None I
P/G 0.7395 likely_pathogenic 0.7448 pathogenic -1.605 Destabilizing 0.967 D 0.761 deleterious None None None None I
P/H 0.57 likely_pathogenic 0.5746 pathogenic -1.088 Destabilizing 1.0 D 0.795 deleterious None None None None I
P/I 0.5747 likely_pathogenic 0.5712 pathogenic -0.803 Destabilizing 0.998 D 0.825 deleterious None None None None I
P/K 0.7461 likely_pathogenic 0.7347 pathogenic -0.944 Destabilizing 0.995 D 0.749 deleterious None None None None I
P/L 0.3348 likely_benign 0.3879 ambiguous -0.803 Destabilizing 0.978 D 0.809 deleterious D 0.522331096 None None I
P/M 0.5467 ambiguous 0.552 ambiguous -0.653 Destabilizing 1.0 D 0.801 deleterious None None None None I
P/N 0.7942 likely_pathogenic 0.782 pathogenic -0.739 Destabilizing 0.999 D 0.802 deleterious None None None None I
P/Q 0.4049 ambiguous 0.3998 ambiguous -1.027 Destabilizing 0.999 D 0.725 prob.delet. N 0.486323169 None None I
P/R 0.5936 likely_pathogenic 0.6011 pathogenic -0.408 Destabilizing 0.997 D 0.799 deleterious N 0.509542759 None None I
P/S 0.318 likely_benign 0.3217 benign -1.228 Destabilizing 0.956 D 0.706 prob.neutral N 0.486069679 None None I
P/T 0.3623 ambiguous 0.3492 ambiguous -1.174 Destabilizing 0.978 D 0.736 prob.delet. N 0.498946922 None None I
P/V 0.4502 ambiguous 0.4639 ambiguous -0.955 Destabilizing 0.983 D 0.777 deleterious None None None None I
P/W 0.929 likely_pathogenic 0.9414 pathogenic -1.39 Destabilizing 1.0 D 0.809 deleterious None None None None I
P/Y 0.8142 likely_pathogenic 0.819 pathogenic -1.089 Destabilizing 0.999 D 0.841 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.