Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29242 | 87949;87950;87951 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
N2AB | 27601 | 83026;83027;83028 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
N2A | 26674 | 80245;80246;80247 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
N2B | 20177 | 60754;60755;60756 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
Novex-1 | 20302 | 61129;61130;61131 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
Novex-2 | 20369 | 61330;61331;61332 | chr2:178557538;178557537;178557536 | chr2:179422265;179422264;179422263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1416855828 | None | 0.999 | N | 0.557 | 0.216 | 0.225902525712 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs1416855828 | None | 0.999 | N | 0.557 | 0.216 | 0.225902525712 | gnomAD-4.0.0 | 2.02983E-06 | None | None | None | None | N | None | 1.74679E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20492E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1396 | likely_benign | 0.1554 | benign | -0.486 | Destabilizing | 0.997 | D | 0.465 | neutral | N | 0.499183752 | None | None | N |
S/C | 0.2834 | likely_benign | 0.3648 | ambiguous | -0.374 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.488640573 | None | None | N |
S/D | 0.8851 | likely_pathogenic | 0.9106 | pathogenic | -1.284 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
S/E | 0.9396 | likely_pathogenic | 0.9473 | pathogenic | -1.169 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
S/F | 0.8123 | likely_pathogenic | 0.8648 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.895 | deleterious | N | 0.498982921 | None | None | N |
S/G | 0.105 | likely_benign | 0.1227 | benign | -0.841 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
S/H | 0.8771 | likely_pathogenic | 0.9015 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
S/I | 0.8129 | likely_pathogenic | 0.8647 | pathogenic | 0.384 | Stabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
S/K | 0.9806 | likely_pathogenic | 0.9836 | pathogenic | -0.715 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
S/L | 0.4381 | ambiguous | 0.5369 | ambiguous | 0.384 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/M | 0.6433 | likely_pathogenic | 0.694 | pathogenic | 0.433 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/N | 0.594 | likely_pathogenic | 0.656 | pathogenic | -1.095 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
S/P | 0.7458 | likely_pathogenic | 0.8199 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.858 | deleterious | D | 0.525196917 | None | None | N |
S/Q | 0.9011 | likely_pathogenic | 0.9118 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
S/R | 0.9629 | likely_pathogenic | 0.9728 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
S/T | 0.2913 | likely_benign | 0.3243 | benign | -0.754 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.466647259 | None | None | N |
S/V | 0.701 | likely_pathogenic | 0.7742 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
S/W | 0.8883 | likely_pathogenic | 0.9268 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/Y | 0.7657 | likely_pathogenic | 0.8209 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.898 | deleterious | N | 0.497703672 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.