Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29243 | 87952;87953;87954 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
N2AB | 27602 | 83029;83030;83031 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
N2A | 26675 | 80248;80249;80250 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
N2B | 20178 | 60757;60758;60759 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
Novex-1 | 20303 | 61132;61133;61134 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
Novex-2 | 20370 | 61333;61334;61335 | chr2:178557535;178557534;178557533 | chr2:179422262;179422261;179422260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559256317 | None | 0.925 | N | 0.515 | 0.254 | 0.357519025918 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1559256317 | None | 0.925 | N | 0.515 | 0.254 | 0.357519025918 | gnomAD-4.0.0 | 3.18227E-06 | None | None | None | None | N | None | 0 | 4.57268E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1125 | likely_benign | 0.1355 | benign | -0.939 | Destabilizing | 0.248 | N | 0.152 | neutral | N | 0.483366151 | None | None | N |
T/C | 0.5739 | likely_pathogenic | 0.682 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
T/D | 0.7505 | likely_pathogenic | 0.837 | pathogenic | -0.465 | Destabilizing | 0.991 | D | 0.519 | neutral | None | None | None | None | N |
T/E | 0.5611 | ambiguous | 0.6544 | pathogenic | -0.465 | Destabilizing | 0.942 | D | 0.521 | neutral | None | None | None | None | N |
T/F | 0.463 | ambiguous | 0.5761 | pathogenic | -1.012 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | N |
T/G | 0.5647 | likely_pathogenic | 0.6404 | pathogenic | -1.199 | Destabilizing | 0.97 | D | 0.592 | neutral | None | None | None | None | N |
T/H | 0.4307 | ambiguous | 0.5567 | ambiguous | -1.496 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
T/I | 0.2286 | likely_benign | 0.2758 | benign | -0.333 | Destabilizing | 0.925 | D | 0.515 | neutral | N | 0.498335603 | None | None | N |
T/K | 0.2804 | likely_benign | 0.3441 | ambiguous | -0.884 | Destabilizing | 0.925 | D | 0.509 | neutral | N | 0.472399795 | None | None | N |
T/L | 0.1464 | likely_benign | 0.1875 | benign | -0.333 | Destabilizing | 0.942 | D | 0.501 | neutral | None | None | None | None | N |
T/M | 0.1082 | likely_benign | 0.1354 | benign | 0.045 | Stabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | N |
T/N | 0.2694 | likely_benign | 0.3312 | benign | -0.829 | Destabilizing | 0.996 | D | 0.478 | neutral | None | None | None | None | N |
T/P | 0.161 | likely_benign | 0.1967 | benign | -0.503 | Destabilizing | 0.998 | D | 0.591 | neutral | N | 0.467802052 | None | None | N |
T/Q | 0.3028 | likely_benign | 0.3723 | ambiguous | -1.01 | Destabilizing | 0.746 | D | 0.35 | neutral | None | None | None | None | N |
T/R | 0.2546 | likely_benign | 0.3437 | ambiguous | -0.619 | Destabilizing | 0.989 | D | 0.579 | neutral | N | 0.503472064 | None | None | N |
T/S | 0.2033 | likely_benign | 0.245 | benign | -1.084 | Destabilizing | 0.925 | D | 0.467 | neutral | N | 0.47580546 | None | None | N |
T/V | 0.1631 | likely_benign | 0.191 | benign | -0.503 | Destabilizing | 0.304 | N | 0.198 | neutral | None | None | None | None | N |
T/W | 0.8295 | likely_pathogenic | 0.9017 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
T/Y | 0.5095 | ambiguous | 0.6193 | pathogenic | -0.722 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.