Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29249 | 87970;87971;87972 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
N2AB | 27608 | 83047;83048;83049 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
N2A | 26681 | 80266;80267;80268 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
N2B | 20184 | 60775;60776;60777 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
Novex-1 | 20309 | 61150;61151;61152 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
Novex-2 | 20376 | 61351;61352;61353 | chr2:178557517;178557516;178557515 | chr2:179422244;179422243;179422242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.656 | N | 0.473 | 0.188 | 0.387850303812 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3491 | ambiguous | 0.3035 | benign | -1.325 | Destabilizing | 0.014 | N | 0.236 | neutral | N | 0.465092608 | None | None | I |
V/C | 0.8033 | likely_pathogenic | 0.78 | pathogenic | -1.294 | Destabilizing | 0.994 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/D | 0.9076 | likely_pathogenic | 0.8849 | pathogenic | -1.271 | Destabilizing | 0.971 | D | 0.797 | deleterious | D | 0.524395011 | None | None | I |
V/E | 0.8142 | likely_pathogenic | 0.7719 | pathogenic | -1.305 | Destabilizing | 0.956 | D | 0.747 | deleterious | None | None | None | None | I |
V/F | 0.5147 | ambiguous | 0.496 | ambiguous | -1.373 | Destabilizing | 0.971 | D | 0.739 | prob.delet. | N | 0.477933059 | None | None | I |
V/G | 0.5846 | likely_pathogenic | 0.5432 | ambiguous | -1.579 | Destabilizing | 0.89 | D | 0.711 | prob.delet. | N | 0.507304714 | None | None | I |
V/H | 0.9144 | likely_pathogenic | 0.8969 | pathogenic | -1.161 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | I |
V/I | 0.0978 | likely_benign | 0.0948 | benign | -0.746 | Destabilizing | 0.656 | D | 0.473 | neutral | N | 0.500914548 | None | None | I |
V/K | 0.8151 | likely_pathogenic | 0.7679 | pathogenic | -0.96 | Destabilizing | 0.956 | D | 0.751 | deleterious | None | None | None | None | I |
V/L | 0.6154 | likely_pathogenic | 0.5822 | pathogenic | -0.746 | Destabilizing | 0.489 | N | 0.449 | neutral | N | 0.520156457 | None | None | I |
V/M | 0.3551 | ambiguous | 0.3364 | benign | -0.666 | Destabilizing | 0.993 | D | 0.651 | neutral | None | None | None | None | I |
V/N | 0.7697 | likely_pathogenic | 0.716 | pathogenic | -0.812 | Destabilizing | 0.978 | D | 0.802 | deleterious | None | None | None | None | I |
V/P | 0.9092 | likely_pathogenic | 0.884 | pathogenic | -0.906 | Destabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | I |
V/Q | 0.7519 | likely_pathogenic | 0.7098 | pathogenic | -1.064 | Destabilizing | 0.978 | D | 0.772 | deleterious | None | None | None | None | I |
V/R | 0.7508 | likely_pathogenic | 0.7151 | pathogenic | -0.482 | Destabilizing | 0.956 | D | 0.806 | deleterious | None | None | None | None | I |
V/S | 0.5601 | ambiguous | 0.4935 | ambiguous | -1.324 | Destabilizing | 0.915 | D | 0.672 | neutral | None | None | None | None | I |
V/T | 0.3821 | ambiguous | 0.32 | benign | -1.25 | Destabilizing | 0.86 | D | 0.455 | neutral | None | None | None | None | I |
V/W | 0.9735 | likely_pathogenic | 0.9688 | pathogenic | -1.476 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | I |
V/Y | 0.8722 | likely_pathogenic | 0.8571 | pathogenic | -1.14 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.