Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29251 | 87976;87977;87978 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
N2AB | 27610 | 83053;83054;83055 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
N2A | 26683 | 80272;80273;80274 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
N2B | 20186 | 60781;60782;60783 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
Novex-1 | 20311 | 61156;61157;61158 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
Novex-2 | 20378 | 61357;61358;61359 | chr2:178557511;178557510;178557509 | chr2:179422238;179422237;179422236 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/Q | rs373830762 | None | 0.811 | N | 0.25 | 0.109 | 0.110078149338 | gnomAD-4.0.0 | 4.10512E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49711E-06 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4888 | ambiguous | 0.4924 | ambiguous | -0.275 | Destabilizing | 0.97 | D | 0.529 | neutral | None | None | None | None | N |
R/C | 0.2814 | likely_benign | 0.2771 | benign | -0.231 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/D | 0.8588 | likely_pathogenic | 0.8478 | pathogenic | -0.078 | Destabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
R/E | 0.5306 | ambiguous | 0.5127 | ambiguous | -0.003 | Destabilizing | 0.942 | D | 0.479 | neutral | None | None | None | None | N |
R/F | 0.8378 | likely_pathogenic | 0.822 | pathogenic | -0.388 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
R/G | 0.3279 | likely_benign | 0.3253 | benign | -0.514 | Destabilizing | 0.992 | D | 0.587 | neutral | N | 0.446559988 | None | None | N |
R/H | 0.1694 | likely_benign | 0.1625 | benign | -0.96 | Destabilizing | 0.996 | D | 0.453 | neutral | None | None | None | None | N |
R/I | 0.6741 | likely_pathogenic | 0.6456 | pathogenic | 0.334 | Stabilizing | 0.996 | D | 0.674 | neutral | None | None | None | None | N |
R/K | 0.1292 | likely_benign | 0.1188 | benign | -0.323 | Destabilizing | 0.155 | N | 0.089 | neutral | None | None | None | None | N |
R/L | 0.4884 | ambiguous | 0.4897 | ambiguous | 0.334 | Stabilizing | 0.984 | D | 0.587 | neutral | N | 0.512419621 | None | None | N |
R/M | 0.5415 | ambiguous | 0.5206 | ambiguous | 0.036 | Stabilizing | 1.0 | D | 0.544 | neutral | None | None | None | None | N |
R/N | 0.73 | likely_pathogenic | 0.7226 | pathogenic | 0.122 | Stabilizing | 0.97 | D | 0.478 | neutral | None | None | None | None | N |
R/P | 0.6969 | likely_pathogenic | 0.6685 | pathogenic | 0.152 | Stabilizing | 0.998 | D | 0.631 | neutral | N | 0.458257062 | None | None | N |
R/Q | 0.1255 | likely_benign | 0.1205 | benign | -0.063 | Destabilizing | 0.811 | D | 0.25 | neutral | N | 0.482443431 | None | None | N |
R/S | 0.5897 | likely_pathogenic | 0.5867 | pathogenic | -0.395 | Destabilizing | 0.97 | D | 0.527 | neutral | None | None | None | None | N |
R/T | 0.4701 | ambiguous | 0.459 | ambiguous | -0.172 | Destabilizing | 0.985 | D | 0.549 | neutral | None | None | None | None | N |
R/V | 0.6738 | likely_pathogenic | 0.6552 | pathogenic | 0.152 | Stabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | N |
R/W | 0.332 | likely_benign | 0.324 | benign | -0.28 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
R/Y | 0.6447 | likely_pathogenic | 0.6286 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.