Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29254 | 87985;87986;87987 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
N2AB | 27613 | 83062;83063;83064 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
N2A | 26686 | 80281;80282;80283 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
N2B | 20189 | 60790;60791;60792 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
Novex-1 | 20314 | 61165;61166;61167 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
Novex-2 | 20381 | 61366;61367;61368 | chr2:178557502;178557501;178557500 | chr2:179422229;179422228;179422227 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.997 | N | 0.706 | 0.323 | 0.480349945188 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
I/T | rs868383233 | None | 0.98 | N | 0.773 | 0.498 | 0.686775400422 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs868383233 | None | 0.98 | N | 0.773 | 0.498 | 0.686775400422 | gnomAD-4.0.0 | 8.05539E-06 | None | None | None | None | N | None | 9.3413E-05 | 0 | None | 0 | 0 | None | 0 | 6.57895E-04 | 0 | 0 | 3.20215E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7826 | likely_pathogenic | 0.7818 | pathogenic | -3.01 | Highly Destabilizing | 0.469 | N | 0.517 | neutral | None | None | None | None | N |
I/C | 0.877 | likely_pathogenic | 0.8842 | pathogenic | -2.701 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
I/D | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -3.376 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
I/E | 0.9948 | likely_pathogenic | 0.9954 | pathogenic | -3.071 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.5971 | likely_pathogenic | 0.6322 | pathogenic | -1.846 | Destabilizing | 0.997 | D | 0.706 | prob.neutral | N | 0.477333493 | None | None | N |
I/G | 0.9828 | likely_pathogenic | 0.9858 | pathogenic | -3.632 | Highly Destabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
I/H | 0.9918 | likely_pathogenic | 0.9941 | pathogenic | -3.12 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/K | 0.9901 | likely_pathogenic | 0.9927 | pathogenic | -2.328 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
I/L | 0.1936 | likely_benign | 0.1945 | benign | -1.156 | Destabilizing | 0.817 | D | 0.407 | neutral | N | 0.470471424 | None | None | N |
I/M | 0.1284 | likely_benign | 0.1387 | benign | -1.469 | Destabilizing | 0.997 | D | 0.68 | prob.neutral | N | 0.412239558 | None | None | N |
I/N | 0.9737 | likely_pathogenic | 0.9814 | pathogenic | -2.927 | Highly Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.506619924 | None | None | N |
I/P | 0.9969 | likely_pathogenic | 0.9984 | pathogenic | -1.762 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
I/Q | 0.982 | likely_pathogenic | 0.9861 | pathogenic | -2.643 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
I/R | 0.983 | likely_pathogenic | 0.9878 | pathogenic | -2.217 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
I/S | 0.9314 | likely_pathogenic | 0.9453 | pathogenic | -3.666 | Highly Destabilizing | 0.961 | D | 0.748 | deleterious | N | 0.48800869 | None | None | N |
I/T | 0.9212 | likely_pathogenic | 0.921 | pathogenic | -3.187 | Highly Destabilizing | 0.98 | D | 0.773 | deleterious | N | 0.505859456 | None | None | N |
I/V | 0.1036 | likely_benign | 0.0939 | benign | -1.762 | Destabilizing | 0.219 | N | 0.223 | neutral | N | 0.417122516 | None | None | N |
I/W | 0.9915 | likely_pathogenic | 0.9948 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
I/Y | 0.964 | likely_pathogenic | 0.9738 | pathogenic | -1.971 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.