Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29264 | 88015;88016;88017 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
N2AB | 27623 | 83092;83093;83094 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
N2A | 26696 | 80311;80312;80313 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
N2B | 20199 | 60820;60821;60822 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
Novex-1 | 20324 | 61195;61196;61197 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
Novex-2 | 20391 | 61396;61397;61398 | chr2:178557472;178557471;178557470 | chr2:179422199;179422198;179422197 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.379 | N | 0.349 | 0.134 | 0.16115917748 | gnomAD-4.0.0 | 6.84173E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99421E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3321 | likely_benign | 0.4366 | ambiguous | -0.559 | Destabilizing | 0.25 | N | 0.471 | neutral | None | None | None | None | I |
N/C | 0.4003 | ambiguous | 0.5339 | ambiguous | 0.291 | Stabilizing | 0.992 | D | 0.525 | neutral | None | None | None | None | I |
N/D | 0.0673 | likely_benign | 0.076 | benign | -0.391 | Destabilizing | 0.001 | N | 0.09 | neutral | N | 0.350532164 | None | None | I |
N/E | 0.6296 | likely_pathogenic | 0.7211 | pathogenic | -0.411 | Destabilizing | 0.25 | N | 0.361 | neutral | None | None | None | None | I |
N/F | 0.8086 | likely_pathogenic | 0.8662 | pathogenic | -0.946 | Destabilizing | 0.92 | D | 0.517 | neutral | None | None | None | None | I |
N/G | 0.3387 | likely_benign | 0.4489 | ambiguous | -0.747 | Destabilizing | 0.25 | N | 0.379 | neutral | None | None | None | None | I |
N/H | 0.2343 | likely_benign | 0.3119 | benign | -0.893 | Destabilizing | 0.896 | D | 0.47 | neutral | N | 0.511611545 | None | None | I |
N/I | 0.5839 | likely_pathogenic | 0.6782 | pathogenic | -0.141 | Destabilizing | 0.896 | D | 0.528 | neutral | N | 0.511958261 | None | None | I |
N/K | 0.6606 | likely_pathogenic | 0.7515 | pathogenic | 0.091 | Stabilizing | 0.379 | N | 0.349 | neutral | N | 0.510744753 | None | None | I |
N/L | 0.4959 | ambiguous | 0.6081 | pathogenic | -0.141 | Destabilizing | 0.85 | D | 0.491 | neutral | None | None | None | None | I |
N/M | 0.639 | likely_pathogenic | 0.7331 | pathogenic | 0.526 | Stabilizing | 0.992 | D | 0.507 | neutral | None | None | None | None | I |
N/P | 0.699 | likely_pathogenic | 0.7699 | pathogenic | -0.255 | Destabilizing | 0.92 | D | 0.493 | neutral | None | None | None | None | I |
N/Q | 0.6204 | likely_pathogenic | 0.7176 | pathogenic | -0.567 | Destabilizing | 0.85 | D | 0.411 | neutral | None | None | None | None | I |
N/R | 0.6566 | likely_pathogenic | 0.7502 | pathogenic | 0.192 | Stabilizing | 0.85 | D | 0.424 | neutral | None | None | None | None | I |
N/S | 0.0724 | likely_benign | 0.0913 | benign | -0.241 | Destabilizing | 0.016 | N | 0.131 | neutral | N | 0.483307435 | None | None | I |
N/T | 0.1552 | likely_benign | 0.1923 | benign | -0.113 | Destabilizing | 0.379 | N | 0.326 | neutral | N | 0.474053234 | None | None | I |
N/V | 0.4623 | ambiguous | 0.5797 | pathogenic | -0.255 | Destabilizing | 0.85 | D | 0.491 | neutral | None | None | None | None | I |
N/W | 0.9295 | likely_pathogenic | 0.9544 | pathogenic | -0.846 | Destabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | I |
N/Y | 0.4025 | ambiguous | 0.4851 | ambiguous | -0.578 | Destabilizing | 0.963 | D | 0.514 | neutral | N | 0.494170301 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.