Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29267 | 88024;88025;88026 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
N2AB | 27626 | 83101;83102;83103 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
N2A | 26699 | 80320;80321;80322 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
N2B | 20202 | 60829;60830;60831 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
Novex-1 | 20327 | 61204;61205;61206 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
Novex-2 | 20394 | 61405;61406;61407 | chr2:178557463;178557462;178557461 | chr2:179422190;179422189;179422188 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.971 | N | 0.703 | 0.423 | 0.607230486204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1558 | likely_benign | 0.1914 | benign | -0.4 | Destabilizing | 0.717 | D | 0.641 | neutral | None | None | None | None | I |
S/C | 0.1072 | likely_benign | 0.1399 | benign | -0.178 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.494592056 | None | None | I |
S/D | 0.7661 | likely_pathogenic | 0.7826 | pathogenic | -0.232 | Destabilizing | 0.754 | D | 0.621 | neutral | None | None | None | None | I |
S/E | 0.8677 | likely_pathogenic | 0.8911 | pathogenic | -0.334 | Destabilizing | 0.86 | D | 0.652 | neutral | None | None | None | None | I |
S/F | 0.4642 | ambiguous | 0.5648 | pathogenic | -1.048 | Destabilizing | 0.993 | D | 0.704 | prob.neutral | None | None | None | None | I |
S/G | 0.196 | likely_benign | 0.2453 | benign | -0.499 | Destabilizing | 0.489 | N | 0.608 | neutral | N | 0.479705988 | None | None | I |
S/H | 0.526 | ambiguous | 0.5931 | pathogenic | -1.071 | Destabilizing | 0.956 | D | 0.615 | neutral | None | None | None | None | I |
S/I | 0.4319 | ambiguous | 0.5417 | ambiguous | -0.267 | Destabilizing | 0.971 | D | 0.703 | prob.neutral | N | 0.515378882 | None | None | I |
S/K | 0.9172 | likely_pathogenic | 0.9499 | pathogenic | -0.468 | Destabilizing | 0.754 | D | 0.653 | neutral | None | None | None | None | I |
S/L | 0.2111 | likely_benign | 0.269 | benign | -0.267 | Destabilizing | 0.956 | D | 0.672 | neutral | None | None | None | None | I |
S/M | 0.3176 | likely_benign | 0.3765 | ambiguous | 0.185 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | I |
S/N | 0.2063 | likely_benign | 0.2516 | benign | -0.181 | Destabilizing | 0.006 | N | 0.398 | neutral | N | 0.500895478 | None | None | I |
S/P | 0.9669 | likely_pathogenic | 0.9744 | pathogenic | -0.284 | Destabilizing | 0.978 | D | 0.628 | neutral | None | None | None | None | I |
S/Q | 0.7327 | likely_pathogenic | 0.7997 | pathogenic | -0.528 | Destabilizing | 0.956 | D | 0.675 | neutral | None | None | None | None | I |
S/R | 0.8779 | likely_pathogenic | 0.9328 | pathogenic | -0.195 | Destabilizing | 0.942 | D | 0.631 | neutral | N | 0.4963988 | None | None | I |
S/T | 0.1713 | likely_benign | 0.1743 | benign | -0.274 | Destabilizing | 0.822 | D | 0.621 | neutral | N | 0.493071118 | None | None | I |
S/V | 0.3853 | ambiguous | 0.4826 | ambiguous | -0.284 | Destabilizing | 0.978 | D | 0.699 | prob.neutral | None | None | None | None | I |
S/W | 0.6874 | likely_pathogenic | 0.7402 | pathogenic | -1.037 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | I |
S/Y | 0.4277 | ambiguous | 0.4863 | ambiguous | -0.758 | Destabilizing | 0.993 | D | 0.706 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.