Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29268 | 88027;88028;88029 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
N2AB | 27627 | 83104;83105;83106 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
N2A | 26700 | 80323;80324;80325 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
N2B | 20203 | 60832;60833;60834 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
Novex-1 | 20328 | 61207;61208;61209 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
Novex-2 | 20395 | 61408;61409;61410 | chr2:178557460;178557459;178557458 | chr2:179422187;179422186;179422185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.062 | N | 0.264 | 0.058 | 0.119812018005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2852 | likely_benign | 0.3951 | ambiguous | -0.733 | Destabilizing | 0.935 | D | 0.363 | neutral | None | None | None | None | I |
A/D | 0.1677 | likely_benign | 0.2216 | benign | -0.447 | Destabilizing | 0.149 | N | 0.405 | neutral | None | None | None | None | I |
A/E | 0.1597 | likely_benign | 0.2014 | benign | -0.609 | Destabilizing | 0.117 | N | 0.334 | neutral | N | 0.451003016 | None | None | I |
A/F | 0.239 | likely_benign | 0.3358 | benign | -0.923 | Destabilizing | 0.555 | D | 0.495 | neutral | None | None | None | None | I |
A/G | 0.1304 | likely_benign | 0.1615 | benign | -0.259 | Destabilizing | 0.027 | N | 0.251 | neutral | N | 0.504320213 | None | None | I |
A/H | 0.2667 | likely_benign | 0.3557 | ambiguous | -0.315 | Destabilizing | 0.001 | N | 0.297 | neutral | None | None | None | None | I |
A/I | 0.1285 | likely_benign | 0.1853 | benign | -0.349 | Destabilizing | 0.081 | N | 0.402 | neutral | None | None | None | None | I |
A/K | 0.2569 | likely_benign | 0.3378 | benign | -0.516 | Destabilizing | 0.081 | N | 0.411 | neutral | None | None | None | None | I |
A/L | 0.0921 | likely_benign | 0.1225 | benign | -0.349 | Destabilizing | 0.081 | N | 0.334 | neutral | None | None | None | None | I |
A/M | 0.1251 | likely_benign | 0.175 | benign | -0.339 | Destabilizing | 0.555 | D | 0.419 | neutral | None | None | None | None | I |
A/N | 0.1325 | likely_benign | 0.1814 | benign | -0.214 | Destabilizing | 0.081 | N | 0.429 | neutral | None | None | None | None | I |
A/P | 0.0639 | likely_benign | 0.0835 | benign | -0.278 | Destabilizing | None | N | 0.233 | neutral | N | 0.347318501 | None | None | I |
A/Q | 0.1788 | likely_benign | 0.2354 | benign | -0.513 | Destabilizing | 0.38 | N | 0.457 | neutral | None | None | None | None | I |
A/R | 0.2579 | likely_benign | 0.322 | benign | -0.058 | Destabilizing | 0.38 | N | 0.433 | neutral | None | None | None | None | I |
A/S | 0.079 | likely_benign | 0.0896 | benign | -0.402 | Destabilizing | 0.002 | N | 0.182 | neutral | N | 0.44985101 | None | None | I |
A/T | 0.0676 | likely_benign | 0.0823 | benign | -0.488 | Destabilizing | 0.062 | N | 0.264 | neutral | N | 0.45685434 | None | None | I |
A/V | 0.0799 | likely_benign | 0.1028 | benign | -0.278 | Destabilizing | 0.002 | N | 0.238 | neutral | N | 0.470697221 | None | None | I |
A/W | 0.5523 | ambiguous | 0.6835 | pathogenic | -1.046 | Destabilizing | 0.935 | D | 0.577 | neutral | None | None | None | None | I |
A/Y | 0.3223 | likely_benign | 0.4282 | ambiguous | -0.692 | Destabilizing | 0.38 | N | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.