Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29272 | 88039;88040;88041 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
N2AB | 27631 | 83116;83117;83118 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
N2A | 26704 | 80335;80336;80337 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
N2B | 20207 | 60844;60845;60846 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
Novex-1 | 20332 | 61219;61220;61221 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
Novex-2 | 20399 | 61420;61421;61422 | chr2:178557448;178557447;178557446 | chr2:179422175;179422174;179422173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs886039083 | -1.933 | 1.0 | D | 0.874 | 0.879 | 0.882574075922 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
Y/C | rs886039083 | -1.933 | 1.0 | D | 0.874 | 0.879 | 0.882574075922 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
Y/C | rs886039083 | -1.933 | 1.0 | D | 0.874 | 0.879 | 0.882574075922 | gnomAD-4.0.0 | 1.11534E-05 | None | None | None | None | N | None | 0 | 1.6665E-05 | None | 0 | 2.22856E-05 | None | 0 | 0 | 1.27134E-05 | 0 | 1.60102E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9984 | likely_pathogenic | 0.9985 | pathogenic | -3.898 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Y/C | 0.9147 | likely_pathogenic | 0.9369 | pathogenic | -2.27 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.65838814 | None | None | N |
Y/D | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -4.007 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.658589944 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.812 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/F | 0.2299 | likely_benign | 0.2105 | benign | -1.652 | Destabilizing | 0.999 | D | 0.642 | neutral | D | 0.584379413 | None | None | N |
Y/G | 0.9945 | likely_pathogenic | 0.9954 | pathogenic | -4.263 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
Y/H | 0.9818 | likely_pathogenic | 0.9811 | pathogenic | -2.81 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.657984531 | None | None | N |
Y/I | 0.9863 | likely_pathogenic | 0.9844 | pathogenic | -2.64 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/K | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.782 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/L | 0.9739 | likely_pathogenic | 0.9771 | pathogenic | -2.64 | Highly Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/M | 0.9911 | likely_pathogenic | 0.9915 | pathogenic | -2.319 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.9872 | likely_pathogenic | 0.9862 | pathogenic | -3.475 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.65838814 | None | None | N |
Y/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.08 | Highly Destabilizing | 1.0 | D | 0.934 | deleterious | None | None | None | None | N |
Y/Q | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -3.266 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/R | 0.9966 | likely_pathogenic | 0.9967 | pathogenic | -2.391 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/S | 0.9923 | likely_pathogenic | 0.9928 | pathogenic | -3.793 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.65838814 | None | None | N |
Y/T | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -3.498 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/V | 0.9801 | likely_pathogenic | 0.9789 | pathogenic | -3.08 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Y/W | 0.8054 | likely_pathogenic | 0.8372 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.