Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29275 | 88048;88049;88050 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
N2AB | 27634 | 83125;83126;83127 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
N2A | 26707 | 80344;80345;80346 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
N2B | 20210 | 60853;60854;60855 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
Novex-1 | 20335 | 61228;61229;61230 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
Novex-2 | 20402 | 61429;61430;61431 | chr2:178557439;178557438;178557437 | chr2:179422166;179422165;179422164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs766410679 | -1.028 | 0.31 | D | 0.373 | 0.213 | 0.229264304666 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8201 | likely_pathogenic | 0.8096 | pathogenic | -1.201 | Destabilizing | 0.826 | D | 0.588 | neutral | D | 0.531076827 | None | None | N |
E/C | 0.9842 | likely_pathogenic | 0.9825 | pathogenic | -0.553 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
E/D | 0.8285 | likely_pathogenic | 0.7893 | pathogenic | -1.824 | Destabilizing | 0.92 | D | 0.618 | neutral | N | 0.482942581 | None | None | N |
E/F | 0.9874 | likely_pathogenic | 0.9843 | pathogenic | -0.853 | Destabilizing | 0.982 | D | 0.745 | deleterious | None | None | None | None | N |
E/G | 0.9314 | likely_pathogenic | 0.921 | pathogenic | -1.603 | Destabilizing | 0.959 | D | 0.641 | neutral | N | 0.514746999 | None | None | N |
E/H | 0.9638 | likely_pathogenic | 0.9557 | pathogenic | -0.825 | Destabilizing | 0.991 | D | 0.662 | neutral | None | None | None | None | N |
E/I | 0.9579 | likely_pathogenic | 0.9621 | pathogenic | -0.047 | Destabilizing | 0.964 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/K | 0.9533 | likely_pathogenic | 0.9499 | pathogenic | -1.384 | Destabilizing | 0.852 | D | 0.645 | neutral | N | 0.518453074 | None | None | N |
E/L | 0.9482 | likely_pathogenic | 0.9516 | pathogenic | -0.047 | Destabilizing | 0.046 | N | 0.585 | neutral | None | None | None | None | N |
E/M | 0.9428 | likely_pathogenic | 0.9381 | pathogenic | 0.638 | Stabilizing | 0.982 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/N | 0.9741 | likely_pathogenic | 0.9693 | pathogenic | -1.702 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
E/P | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -0.417 | Destabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
E/Q | 0.6123 | likely_pathogenic | 0.5841 | pathogenic | -1.356 | Destabilizing | 0.31 | N | 0.373 | neutral | D | 0.523271333 | None | None | N |
E/R | 0.9606 | likely_pathogenic | 0.9584 | pathogenic | -1.284 | Destabilizing | 0.939 | D | 0.633 | neutral | None | None | None | None | N |
E/S | 0.907 | likely_pathogenic | 0.8965 | pathogenic | -2.269 | Highly Destabilizing | 0.939 | D | 0.631 | neutral | None | None | None | None | N |
E/T | 0.9549 | likely_pathogenic | 0.9521 | pathogenic | -1.886 | Destabilizing | 0.969 | D | 0.595 | neutral | None | None | None | None | N |
E/V | 0.885 | likely_pathogenic | 0.8953 | pathogenic | -0.417 | Destabilizing | 0.852 | D | 0.644 | neutral | D | 0.531837296 | None | None | N |
E/W | 0.9963 | likely_pathogenic | 0.9953 | pathogenic | -1.029 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.985 | likely_pathogenic | 0.9813 | pathogenic | -0.706 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.