Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29276 | 88051;88052;88053 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
N2AB | 27635 | 83128;83129;83130 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
N2A | 26708 | 80347;80348;80349 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
N2B | 20211 | 60856;60857;60858 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
Novex-1 | 20336 | 61231;61232;61233 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
Novex-2 | 20403 | 61432;61433;61434 | chr2:178557436;178557435;178557434 | chr2:179422163;179422162;179422161 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/V | None | None | 0.985 | N | 0.603 | 0.419 | 0.46614307118 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8396 | likely_pathogenic | 0.7955 | pathogenic | -2.271 | Highly Destabilizing | 0.989 | D | 0.709 | prob.delet. | None | None | None | None | I |
M/C | 0.7305 | likely_pathogenic | 0.705 | pathogenic | -2.283 | Highly Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
M/D | 0.9965 | likely_pathogenic | 0.9956 | pathogenic | -2.127 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
M/E | 0.9277 | likely_pathogenic | 0.9065 | pathogenic | -1.863 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
M/F | 0.4061 | ambiguous | 0.3833 | ambiguous | -0.714 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
M/G | 0.945 | likely_pathogenic | 0.9334 | pathogenic | -2.779 | Highly Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | I |
M/H | 0.8311 | likely_pathogenic | 0.7982 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
M/I | 0.5658 | likely_pathogenic | 0.5275 | ambiguous | -0.789 | Destabilizing | 0.985 | D | 0.713 | prob.delet. | N | 0.458777137 | None | None | I |
M/K | 0.3842 | ambiguous | 0.3937 | ambiguous | -1.444 | Destabilizing | 0.994 | D | 0.706 | prob.neutral | N | 0.427704869 | None | None | I |
M/L | 0.2379 | likely_benign | 0.2484 | benign | -0.789 | Destabilizing | 0.927 | D | 0.511 | neutral | N | 0.475071954 | None | None | I |
M/N | 0.9468 | likely_pathogenic | 0.9311 | pathogenic | -1.91 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | I |
M/P | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.268 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
M/Q | 0.5412 | ambiguous | 0.4985 | ambiguous | -1.537 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
M/R | 0.4492 | ambiguous | 0.4318 | ambiguous | -1.616 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | N | 0.371928944 | None | None | I |
M/S | 0.8918 | likely_pathogenic | 0.8544 | pathogenic | -2.46 | Highly Destabilizing | 0.995 | D | 0.7 | prob.neutral | None | None | None | None | I |
M/T | 0.7309 | likely_pathogenic | 0.6722 | pathogenic | -2.063 | Highly Destabilizing | 0.994 | D | 0.701 | prob.neutral | N | 0.495660657 | None | None | I |
M/V | 0.1865 | likely_benign | 0.1753 | benign | -1.268 | Destabilizing | 0.985 | D | 0.603 | neutral | N | 0.462950806 | None | None | I |
M/W | 0.7535 | likely_pathogenic | 0.7636 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
M/Y | 0.6258 | likely_pathogenic | 0.6087 | pathogenic | -1.057 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.