Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29282 | 88069;88070;88071 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
N2AB | 27641 | 83146;83147;83148 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
N2A | 26714 | 80365;80366;80367 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
N2B | 20217 | 60874;60875;60876 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
Novex-1 | 20342 | 61249;61250;61251 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
Novex-2 | 20409 | 61450;61451;61452 | chr2:178557418;178557417;178557416 | chr2:179422145;179422144;179422143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1396385719 | -0.119 | 0.008 | N | 0.229 | 0.069 | 0.338834610459 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8171 | likely_pathogenic | 0.8789 | pathogenic | -0.504 | Destabilizing | 0.633 | D | 0.453 | neutral | None | None | None | None | I |
I/C | 0.9308 | likely_pathogenic | 0.9646 | pathogenic | -0.807 | Destabilizing | 0.996 | D | 0.457 | neutral | None | None | None | None | I |
I/D | 0.9662 | likely_pathogenic | 0.9855 | pathogenic | -0.156 | Destabilizing | 0.987 | D | 0.541 | neutral | None | None | None | None | I |
I/E | 0.9623 | likely_pathogenic | 0.9797 | pathogenic | -0.235 | Destabilizing | 0.961 | D | 0.547 | neutral | None | None | None | None | I |
I/F | 0.5014 | ambiguous | 0.5798 | pathogenic | -0.614 | Destabilizing | 0.901 | D | 0.369 | neutral | N | 0.503614049 | None | None | I |
I/G | 0.9513 | likely_pathogenic | 0.9762 | pathogenic | -0.611 | Destabilizing | 0.961 | D | 0.551 | neutral | None | None | None | None | I |
I/H | 0.907 | likely_pathogenic | 0.951 | pathogenic | 0.099 | Stabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | I |
I/K | 0.9002 | likely_pathogenic | 0.9384 | pathogenic | -0.333 | Destabilizing | 0.961 | D | 0.551 | neutral | None | None | None | None | I |
I/L | 0.1548 | likely_benign | 0.1679 | benign | -0.335 | Destabilizing | 0.003 | N | 0.201 | neutral | N | 0.472226437 | None | None | I |
I/M | 0.2833 | likely_benign | 0.3321 | benign | -0.647 | Destabilizing | 0.901 | D | 0.379 | neutral | D | 0.522135182 | None | None | I |
I/N | 0.7946 | likely_pathogenic | 0.8938 | pathogenic | -0.228 | Destabilizing | 0.983 | D | 0.551 | neutral | N | 0.486019667 | None | None | I |
I/P | 0.8841 | likely_pathogenic | 0.9244 | pathogenic | -0.364 | Destabilizing | 0.987 | D | 0.551 | neutral | None | None | None | None | I |
I/Q | 0.9103 | likely_pathogenic | 0.9465 | pathogenic | -0.378 | Destabilizing | 0.987 | D | 0.543 | neutral | None | None | None | None | I |
I/R | 0.8378 | likely_pathogenic | 0.8906 | pathogenic | 0.115 | Stabilizing | 0.961 | D | 0.553 | neutral | None | None | None | None | I |
I/S | 0.783 | likely_pathogenic | 0.8798 | pathogenic | -0.634 | Destabilizing | 0.901 | D | 0.462 | neutral | N | 0.482037999 | None | None | I |
I/T | 0.8434 | likely_pathogenic | 0.9037 | pathogenic | -0.611 | Destabilizing | 0.722 | D | 0.384 | neutral | N | 0.500085042 | None | None | I |
I/V | 0.1752 | likely_benign | 0.2088 | benign | -0.364 | Destabilizing | 0.008 | N | 0.229 | neutral | N | 0.508589882 | None | None | I |
I/W | 0.9453 | likely_pathogenic | 0.9665 | pathogenic | -0.628 | Destabilizing | 0.996 | D | 0.648 | neutral | None | None | None | None | I |
I/Y | 0.833 | likely_pathogenic | 0.8882 | pathogenic | -0.403 | Destabilizing | 0.961 | D | 0.391 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.